| Protein: | gi|15222875, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 330 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15222875, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
399.0 | [0..19] | [330..16] |
|
|
329.0 | [0..2] | [263..1] |
|
|
329.0 | [0..2] | [263..1] |
|
|
326.0 | [0..5] | [263..4] |
|
Region A: Residues: [1-248] |
1 11 21 31 41 51
| | | | | |
1 MALPLPLIFL IFSHLFVSGV RSTSFIMVNK CEYTVWPGLL SNAGVPPLPT TGFVLQKGEE 60
61 RTISAPTSWG GRFWGRTQCS TDTDGKFTCL TGDCGSGTLE CSGSGATPPA TLAEFTLDGS 120
121 NGLDFYDVSL VDGYNVPMLV APQGGSGLNC SSTGCVVDLN GSCPSELKVT SLDGRGKQSM 180
181 GCKSACEAFR TPEYCCSGAH GTPDTCKPSS YSLMFKTACP RAYSYAYDDQ SSTFTCAESP 240
241 NYVITFCP
|
| Detection Method: |  |
| Confidence: | 76.39794 |
| Match: | 2ahnA |
| Description: | No description for 2ahnA was found. |
|
Region A: Residues: [249-330] |
1 11 21 31 41 51
| | | | | |
1 TPNTSQKSSQ DQSPDPKPTT PTGTSSTTPA GDSSTTWSPV DTSMIYEGAL DQNKGSPSTC 60
61 HLSLCGITVT LALAFCRMWR LF
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.762 | a.243.1 | Description not found. |
| View | Download | 0.594 | a.118.1 | ARM repeat |
| View | Download | 0.428 | a.60.5 | Barrier-to-autointegration factor, BAF |
| View | Download | 0.428 | a.60.5 | Barrier-to-autointegration factor, BAF |
| View | Download | 0.410 | a.144.1 | PABC (PABP) domain |
| View | Download | 0.410 | a.144.1 | PABC (PABP) domain |
| View | Download | 0.370 | a.48.3 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
| View | Download | 0.370 | a.48.3 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
| View | Download | 0.351 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.335 | a.105.1 | FIS-like |
| View | Download | 0.334 | a.130.1 | Chorismate mutase II |
| View | Download | 0.249 | a.159.1 | Protein serine/threonine phosphatase 2C, C-terminal domain |
| View | Download | 0.239 | a.240.1 | Description not found. |
| View | Download | 0.223 | d.74.1 | Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) |
| View | Download | 0.216 | a.4.1 | Homeodomain-like |
