| Protein: | gi|225897886, gi... |
| Organism: | Arabidopsis thaliana |
| Length: | 246 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|225897886, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
241.0 | [0..1] | [246..1] |
|
Region A: Residues: [1-185] |
1 11 21 31 41 51
| | | | | |
1 MGRRPCCEKI GLKKGPWSAE EDRILINYIS LHGHPNWRAL PKLAGLLRCG KSCRLRWINY 60
61 LRPDIKRGNF TPHEEDTIIS LHQLLGNRWS AIAAKLPGRT DNEIKNVWHT HLKKRLHHSQ 120
121 DQNNKEDFVS TTAAEMPTSP QQQSSSSADI SAITTLGNNN DISNSNKDSA TSSEDVLAII 180
181 DESFW
|
| Detection Method: |  |
| Confidence: | 33.69897 |
| Match: | 1h88C |
| Description: | c-Myb, DNA-binding domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.334577365229545 | bayes_pls_golite062009 |
| transcription regulator activity | 0.0696342306231097 | bayes_pls_golite062009 |
|
Region A: Residues: [186-246] |
1 11 21 31 41 51
| | | | | |
1 SEVVLMDCDI SGNEKNEKKI ENWEGSLDRN DKGYNHDMEF WFDHLTSSSC IIGEMSDISE 60
61 F
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.394 | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.386 | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.285 | c.47.1 | Thioredoxin-like |
| View | Download | 0.280 | c.47.1 | Thioredoxin-like |
| View | Download | 0.264 | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
