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View Structure Prediction Details

Protein: LECT3_ARATH
Organism: Arabidopsis thaliana
Length: 272 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LECT3_ARATH.

Description E-value Query
Range
Subject
Range
gi|1418331, gi|1... - gi|1418331|emb|CAA65153.1| receptor like protein kinase [Arabidopsis thaliana], pir||T50661 receptor...
289.0 [0..19] [270..19]

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Predicted Domain #1
Region A:
Residues: [1-272]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIQILCFTT LFLAIFTSQV TTAYKFKFDY FGNGTDPISF HGDAEYGPDT DGKSRSGAIA  60
   61 LTRDNIPFSH GRAIFTTPIT FKPNASALYP FKTSFTFSIT PKTNPNQGHG LAFIVVPSNQ 120
  121 NDAGSGLGYL SLLNRTNNGN PNNHLFAVEF DVFQDKSLGD MNDNHVGIDI NSVDSVVSVK 180
  181 SGYWVMTRSG WLFKDLKLSS GDRYKAWIEY NNNYKVVSVT IGLAHLKKPN RPLIEAKFDL 240
  241 SKVIHEVMYT GFAGSMGRGV ERHEIWDWTF QN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 65.0
Match: 2bqpA
Description: Legume lectin
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 1.49960529341364 bayes_pls_golite062009
sugar binding 1.2933880998245 bayes_pls_golite062009
monosaccharide binding 0.641323484799369 bayes_pls_golite062009
protein binding 0.501917973797597 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle