| Protein: | GL3_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 637 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GL3_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
525.0 | [0..5] | [637..7] |
|
Region A: Residues: [1-207] |
1 11 21 31 41 51
| | | | | |
1 MATGQNRTTV PENLKKHLAV SVRNIQWSYG IFWSVSASQS GVLEWGDGYY NGDIKTRKTI 60
61 QASEIKADQL GLRRSEQLSE LYESLSVAES SSSGVAAGSQ VTRRASAAAL SPEDLADTEW 120
121 YYLVCMSFVF NIGEGMPGRT FANGEPIWLC NAHTADSKVF SRSLLAKSAA VKTVVCFPFL 180
181 GGVVEIGTTE HITEDMNVIQ CVKTSFL
|
| Detection Method: |  |
| Confidence: | 1.16 |
| Match: | 1f5mA |
| Description: | Hypothetical protein ykl069wp |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [208-439] |
1 11 21 31 41 51
| | | | | |
1 EAPDPYATIL PARSDYHIDN VLDPQQILGD EIYAPMFSTE PFPTASPSRT TNGFDQEHEQ 60
61 VADDHDSFMT ERITGGASQV QSWQLMDDEL SNCVHQSLNS SDCVSQTFVE GAAGRVAYGA 120
121 RKSRVQRLGQ IQEQQRNVKT LSFDPRNDDV HYQSVISTIF KTNHQLILGP QFRNCDKQSS 180
181 FTRWKKSSSS SSGTATVTAP SQGMLKKIIF DVPRVHQKEK LMLDSPEARD ET
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [440-556] |
1 11 21 31 41 51
| | | | | |
1 GNHAVLEKKR REKLNERFMT LRKIIPSINK IDKVSILDDT IEYLQELERR VQELESCRES 60
61 TDTETRGTMT MKRKKPCDAG ERTSANCANN ETGNGKKVSV NNVGEAEPAD TGFTGLT
|
| Detection Method: | |
| Confidence: | 15.154902 |
| Match: | 1nkpA |
| Description: | Myc prot-oncogene protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.12507195426228 | bayes_pls_golite062009 |
| nucleic acid binding | 0.43204604575196 | bayes_pls_golite062009 |
| DNA binding | 0.40884226851256 | bayes_pls_golite062009 |
| transcription regulator activity | 0.31759335140578 | bayes_pls_golite062009 |
| transcription factor activity | 0.09721565916723 | bayes_pls_golite062009 |
|
Region A: Residues: [557-637] |
1 11 21 31 41 51
| | | | | |
1 DNLRIGSFGN EVVIELRCAW REGVLLEIMD VISDLHLDSH SVQSSTGDGL LCLTVNCKHK 60
61 GSKIATPGMI KEALQRVAWI C
|
| Detection Method: | |
| Confidence: | 1.45 |
| Match: | 1zpvA |
| Description: | ACT domain protein from Streptococcus pneumoniae |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 0.0923752113053079 | bayes_pls_golite062009 |
