| Protein: | gi|9758163, gi|1... |
| Organism: | Arabidopsis thaliana |
| Length: | 917 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|9758163, gi|1....
| Description | E-value | Query Range |
Subject Range |
|
|
672.0 | [0..355] | [911..2] |
|
|
670.0 | [0..358] | [911..1] |
|
Region A: Residues: [1-165] |
1 11 21 31 41 51
| | | | | |
1 MATEAFVKPV VPNGHDGYED EDEDDIPLVF KRNSNTAATT NRPSPINNAM RNSAIGSTKS 60
61 SPPMRSPLTS PNRSASSSTR SSMMKPALPS SSSVQRSTLK SPLRDDRSVV AKERNGFGKA 120
121 PSVSKSDDED SEDDKPLSAR LKLDSKEVTK QPSSSGRGST QQAVQ
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [166-354] |
1 11 21 31 41 51
| | | | | |
1 KSNMRPQGLS DYTKKKVLDE RAPMSSTVQT KTSVGTSSSK PVHIEQKRPL VNNIDRNGLK 60
61 PKTEGHSSQA PAKRPLEKGS SSNQSSVKRP KLSEPARPVK VEQGSHISAT QDAKGKNLDA 120
121 SKPLRANQAT VKEDNSDGDD HVPIASRMKS DSSNNKSSSA KPSSSKMIAS SSRTIAQKPN 180
181 KWVKDSKYS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [355-917] |
1 11 21 31 41 51
| | | | | |
1 KSSKSLPSGD GQKKWKTLQH NGVIFPPPYK RHGVKILFQG KPVDLTPEQE EVATMFAVMR 60
61 ETEYYKKPKF RENFWNDWRK LLGKNHMIKS LDDCDFTPIY EWYMQEKETK KQMTAEEKRI 120
121 VKEEKLKQEE KYMWAVLDGV RERIGNFRVE PPGLFRGRGE HPKMGKLKKR IRPCDITINI 180
181 GKEAPIPECP IPGERWKEVK HDNTVTWLAF WSDPINPKEF KYVFLAASSS LKGQSDKEKY 240
241 EKARKLHNHI GSIRAAYTKD FNNKDVTKRQ IAVATYLIDK LALRAGNEKD DDEADTVGCC 300
301 TLKVGNVECI PPNKLKFDFL GKDSIQYVNT VEVEPLVYKA IGQFQAGKSK TDDLFDELDT 360
361 SKLNTHLKEL MAGLTAKVFR TYNASITLDL MLSKETRDGD VPEKVVVYQQ ANKEVAIICN 420
421 HQRTVSKSHG AQVEKLAVKI EELREQIKEL NIDLDRAKKG RTPLMGSDGK RKRNLTPEAL 480
481 EKKIMQTQGK IEKMERDMQT KEDMKTVALG TSKINYMDPR ITVAWCKRHD VPIEKIFNKS 540
541 LLAKFAWAMD VDPEFRFCSS TDE
|
| Detection Method: | |
| Confidence: | 1000.0 |
| Match: | 1nh3A |
| Description: | Eukaryotic DNA topoisomerase I, catalytic core; Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment |
Matching Structure (courtesy of the PDB): |
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