| Protein: | RDR2_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 1133 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RDR2_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
1263.0 | [0..11] | [1133..4] |
|
|
1251.0 | [0..11] | [1133..4] |
|
|
1230.0 | [0..11] | [1133..4] |
|
|
1217.0 | [0..11] | [1133..30] |
|
|
1180.0 | [0..11] | [1132..5] |
|
|
1159.0 | [0..9] | [1126..11] |
|
|
1154.0 | [0..11] | [1126..4] |
|
Region A: Residues: [1-187] |
1 11 21 31 41 51
| | | | | |
1 MVSETTTNRS TVKISNVPQT IVADELLRFL ELHLGEDTVF ALEIPTTRDN WKPRDFARVQ 60
61 FTTLEVKSRA QLLSSQSKLL FKTHNLRLSE AYDDIIPRPV DPRKRLDDIV LTVGFPESDE 120
121 KRFCALEKWD GVRCWILTEK RRVEFWVWES GDCYKIEVRF EDIIETLSCC VNGDASEIDA 180
181 FLLKLKY
|
| Detection Method: |  |
| Confidence: | 5.39794 |
| Match: | 2cjkA |
| Description: | No description for 2cjkA was found. |
|
Region A: Residues: [188-395] |
1 11 21 31 41 51
| | | | | |
1 GPKVFKRVTV HIATKFKSDR YRFCKEDFDF MWIRTTDFSG SKSIGTSTCF CLEVHNGSTM 60
61 LDIFSGLPYY REDTLSLTYV DGKTFASAAQ IVPLLNAAIL GLEFPYEILF QLNALVHAQK 120
121 ISLFAASDME LIKILRGMSL ETALVILKKL HQQSSICYDP VFFVKTQMQS VVKKMKHSPA 180
181 SAYKRLTEQN IMSCQRAYVT PSKIYLLG
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [396-1133] |
1 11 21 31 41 51
| | | | | |
1 PELETANYVV KNFAEHVSDF MRVTFVEEDW SKLPANALSV NSKEGYFVKP SRTNIYNRVL 60
61 SILGEGITVG PKRFEFLAFS ASQLRGNSVW MFASNEKVKA EDIREWMGCF RKIRSISKCA 120
121 ARMGQLFSAS RQTLIVRAQD VEQIPDIEVT TDGADYCFSD GIGKISLAFA KQVAQKCGLS 180
181 HVPSAFQIRY GGYKGVIAVD RSSFRKLSLR DSMLKFDSNN RMLNVTRWTE SMPCFLNREI 240
241 ICLLSTLGIE DAMFEAMQAV HLSMLGNMLE DRDAALNVLQ KLSGENSKNL LVKMLLQGYA 300
301 PSSEPYLSMM LRVHHESQLS ELKSRCRILV PKGRILIGCM DEMGILEYGQ VYVRVTLTKA 360
361 ELKSRDQSYF RKIDEETSVV IGKVVVTKNP CLHPGDIRVL DAIYEVHFEE KGYLDCIIFP 420
421 QKGERPHPNE CSGGDLDGDQ FFVSWDEKII PSEMDPPMDY AGSRPRLMDH DVTLEEIHKF 480
481 FVDYMISDTL GVISTAHLVH ADRDPEKARS QKCLELANLH SRAVDFAKTG APAEMPYALK 540
541 PREFPDFLER FEKPTYISES VFGKLYRAVK SSLAQRKPEA ESEDTVAYDV TLEEAGFESF 600
601 IETAKAHRDM YGEKLTSLMI YYGAANEEEI LTGILKTKEM YLARDNRRYG DMKDRITLSV 660
661 KDLHKEAMGW FEKSCEDEQQ KKKLASAWYY VTYNPNHRDE KLTFLSFPWI VGDVLLDIKA 720
721 ENAQRQSVEE KTSGLVSI
|
| Detection Method: | |
| Confidence: | 133.0 |
| Match: | 2j7nA |
| Description: | No description for 2j7nA was found. |
