| Protein: | SKP2A_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 360 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SKP2A_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
181.0 | [0..2] | [353..67] |
|
Region A: Residues: [1-291] |
1 11 21 31 41 51
| | | | | |
1 MVMGGEASME LDQCFQKMKM EGISIKEWKD IPVELLMRIL SLVDDRNVIV ASGVCTGWRD 60
61 AISFGLTRLR LSWCNNNMNS LVLSLVPKFV KLQTLNLRQD KPQLEDNAVE AIANHCHELQ 120
121 ELDLSKSLKI TDRSLYALAH GCPDLTKLNL SGCTSFSDTA IAYLTRFCRK LKVLNLCGCV 180
181 KAVTDNALEA IGNNCNQMQS LNLGWCENIS DDGVMSLAYG CPDLRTLDLC GCVLITDESV 240
241 VALADWCVHL RSLGLYYCRN ITDRAMYSLA QSGVKNKPGS WKSVKKGKYD E
|
| Detection Method: |  |
| Confidence: | 16.154902 |
| Match: | 1fqvA |
| Description: | Skp2; Cyclin A/CDK2-associated p19, Skp2 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [292-360] |
1 11 21 31 41 51
| | | | | |
1 EGLRSLNISQ CTALTPSAVQ AVCDSFPALH TCSGRHSLVM SGCLNLTTVH CACILQAHRA 60
61 HNAVPHPAH
|
| Detection Method: | |
| Confidence: | 4.0 |
| Match: | 1dceA |
| Description: | Rab geranylgeranyltransferase alpha-subunit, N-terminal domain; Rab geranylgeranyltransferase alpha-subunit, insert domain; Rab geranylgeranyltransferase alpha-subunit, C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
