YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: NUDT6_ARATH
Organism: Arabidopsis thaliana
Length: 283 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NUDT6_ARATH.

Description E-value Query
Range
Subject
Range
NUDT7_ARATH - Nudix hydrolase 7 OS=Arabidopsis thaliana GN=NUDT7 PE=1 SV=1
226.0 [0..1] [282..1]

Back

Predicted Domain #1
Region A:
Residues: [1-100]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDNEDQESLL LQGVPDNYGG VKVNLTEPMT IEDFVPKLRA SLVYWSNQGT KGIWLKLADG  60
   61 LDNLIAPAKA EGFVCHHAER EYTMLTSWIA DVPSTLPANA 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.889 N/A N/A d.68.4 YhbY-like

Predicted Domain #2
Region A:
Residues: [101-283]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SHRIGVGAFV LNKKTKEVLV VQEIDGHFKG TGVWKLPTGV VKEGENIWEG ALREVEEETG  60
   61 IKTKFVEVLA FRESHQAFLE IKTDIFFLCE LEPTTFEIKK QDSEILAAKW MPIEEYVNQP 120
  121 WNQKKELFRF MANICLKRLQ EMEYMGFSKV LTTTSSGKES YLYCNTDHAN LLNATRGLAS 180
  181 TSG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 28.0
Match: 2fb1A
Description: Crystal structure of Hypothetical protein BT0354
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.960699420760702 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle