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View Structure Prediction Details

Protein: BGAL2_ARATH
Organism: Arabidopsis thaliana
Length: 727 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BGAL2_ARATH.

Description E-value Query
Range
Subject
Range
BGAL2_ARATH - Beta-galactosidase 2 OS=Arabidopsis thaliana GN=BGAL2 PE=2 SV=2
749.0 [0..1] [727..1]

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Predicted Domain #1
Region A:
Residues: [1-449]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSMHFRNKAW IILAILCFSS LIHSTEAVVT YDHKALIING QRRILISGSI HYPRSTPEMW  60
   61 PDLIKKAKEG GLDVIQTYVF WNGHEPSPGN YYFQDRYDLV KFTKLVHQAG LYLDLRIGPY 120
  121 VCAEWNFGGF PVWLKYVPGM VFRTDNEPFK IAMQKFTKKI VDMMKEEKLF ETQGGPIILS 180
  181 QIENEYGPMQ WEMGAAGKAY SKWTAEMALG LSTGVPWIMS KQEDAPYPII DTCNGFYCEG 240
  241 FKPNSDNKPK LWTENWTGWF TEFGGAIPNR PVEDIAFSVA RFIQNGGSFM NYYMYYGGTN 300
  301 FDRTAGVFIA TSYDYDAPID EYGLLREPKY SHLKELHKVI KLCEPALVSV DPTITSLGDK 360
  361 QEIHVFKSKT SCAAFLSNYD TSSAARVMFR GFPYDLPPWS VSILPDCKTE YYNTAKIRAP 420
  421 TILMKMIPTS TKFSWESYNE GSPSSNEAG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 50.69897
Match: 1tg7A
Description: Native structure of beta-galactosidase from Penicillium sp.
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.32563207632796 bayes_pls_golite062009
hydrolase activity 0.85514037342026 bayes_pls_golite062009
hydrolase activity, acting on glycosyl bonds 0.80912338090552 bayes_pls_golite062009
hydrolase activity, hydrolyzing O-glycosyl compounds 0.41375210927547 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [450-727]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TFVKDGLVEQ ISMTRDKTDY FWYFTDITIG SDESFLKTGD NPLLTIFSAG HALHVFVNGL  60
   61 LAGTSYGALS NSKLTFSQNI KLSVGINKLA LLSTAVGLPN AGVHYETWNT GILGPVTLKG 120
  121 VNSGTWDMSK WKWSYKIGLR GEAMSLHTLA GSSAVKWWIK GFVVKKQPLT WYKSSFDTPR 180
  181 GNEPLALDMN TMGKGQVWVN GHNIGRHWPA YTARGNCGRC NYAGIYNEKK CLSHCGEPSQ 240
  241 RWYHVPRSWL KPFGNLLVIF EEWGGDPSGI SLVKRTAK

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.14
Match: 1bhgA
Description: beta-Glucuronidase; beta-Glucuronidase, domain 3
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle