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View Structure Prediction Details

Protein: gi|15222822, gi|...
Organism: Arabidopsis thaliana
Length: 420 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15222822, gi|....

Description E-value Query
Range
Subject
Range
gi|115390913, gi... - gi|115390913|ref|XP_001212961.1| conserved hypothetical protein [Aspergillus terreus NIH2624], gi|11...
211.0 [0..5] [418..950]

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Predicted Domain #1
Region A:
Residues: [1-197]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALLFGIGYV LIIFEESLSF SKSGIALLMA VSLWVVRSIE TSVEIVTLEL QHATSEVSQI  60
   61 VFYMLGAMTI VEIIDAHQGF KLVTDCITSR KPKILLWVIG FATFFLSSVL DNLTSTIVMV 120
  121 SLLRRLIPPS EYRKLLGAVV VIAANAGGAW TPIGDVTTTM LWIHGHISTF STIKNLFLPS 180
  181 AISLVVPLAL MSLTSEV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [198-269]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HGMGLNTPPT PLLAYDRSAP RGKLVFGVGF GALLFVPLFK SLTGLPPYMG ILLGLGVIWI  60
   61 LTDVIHYGDL ER

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [270-420]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QHLKLPHALS RIDSQGALFF LGILLSMSSL DAAGILKVIA NYLDAHIANV ELIASIIGVV  60
   61 SAIIDNVPLV AATMGMYDLS TFPQDSEFWQ LISFCAGTGG SMLITGSAAG VIFMSMEKVN 120
  121 FFWYFRKVSG FAFAGFTAGI MTYLAVHNFP L

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle