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View Structure Prediction Details

Protein: gi|15222822, gi|...
Organism: Arabidopsis thaliana
Length: 420 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15222822, gi|....

Description E-value Query
Range
Subject
Range
gi|115390913, gi... - gi|115390913|ref|XP_001212961.1| conserved hypothetical protein [Aspergillus terreus NIH2624], gi|11...
211.0 [0..5] [418..950]

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Predicted Domain #1
Region A:
Residues: [1-197]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALLFGIGYV LIIFEESLSF SKSGIALLMA VSLWVVRSIE TSVEIVTLEL QHATSEVSQI  60
   61 VFYMLGAMTI VEIIDAHQGF KLVTDCITSR KPKILLWVIG FATFFLSSVL DNLTSTIVMV 120
  121 SLLRRLIPPS EYRKLLGAVV VIAANAGGAW TPIGDVTTTM LWIHGHISTF STIKNLFLPS 180
  181 AISLVVPLAL MSLTSEV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [198-269]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HGMGLNTPPT PLLAYDRSAP RGKLVFGVGF GALLFVPLFK SLTGLPPYMG ILLGLGVIWI  60
   61 LTDVIHYGDL ER

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [270-420]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QHLKLPHALS RIDSQGALFF LGILLSMSSL DAAGILKVIA NYLDAHIANV ELIASIIGVV  60
   61 SAIIDNVPLV AATMGMYDLS TFPQDSEFWQ LISFCAGTGG SMLITGSAAG VIFMSMEKVN 120
  121 FFWYFRKVSG FAFAGFTAGI MTYLAVHNFP L

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle