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View Structure Prediction Details

Protein: RLF23_ARATH
Organism: Arabidopsis thaliana
Length: 138 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RLF23_ARATH.

Description E-value Query
Range
Subject
Range
gi|28628203 - gi|28628203|gb|AAO27366.1| rapid alkalinization factor 1 precursor [Populus balsamifera subsp. trich...
154.0 [0..4] [136..1]

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Predicted Domain #1
Region A:
Residues: [1-138]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRGLSRNSGA AAIFAILLIL AVHNWSVAVS SQSTEFAGDF PPFETECRGT IAECSVSAAL  60
   61 GDGGDLFYGG GEMGEEFEMD SEINRRILAT RRYISYGALR RNTIPCSRRG ASYYNCRRGA 120
  121 QANPYSRGCS AITRCRRS

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 40.124939
Match: PF05498.2
Description: No description for PF05498.2 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle