| Protein: | gi|209529799, gi... |
| Organism: | Arabidopsis thaliana |
| Length: | 671 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|209529799, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
328.0 | [0..5] | [491..10] |
|
Region A: Residues: [1-217] |
1 11 21 31 41 51
| | | | | |
1 MASSSASATV AVDKATSDLL LGPDWTTNME ICDSVNSLHW QAKDVVKAVK KRLQHKSSRV 60
61 QLLALTLLET LVKNCGDYLH HQVAEKNILG EMVKIVKKKA DMQVRDKILV MVDSWQQAFG 120
121 GPEGKYPQYY WAYDELRRSG VEFPRRSPDA SPIITPPVSH PPLRQPQGGY GVPPAGYGVH 180
181 QAGYGVPQAG YGIPQAGYGV PQAGYGIPQV GYGMPSG
|
| Detection Method: |  |
| Confidence: | 57.522879 |
| Match: | 1dvpA |
| Description: | Hrs |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.24093737575291 | bayes_pls_golite062009 |
|
Region A: Residues: [218-404] |
1 11 21 31 41 51
| | | | | |
1 SSRRLDEAMA TEVEGLSLSS IESMRDVMDL LGDMLQAVDP SDREAVKDEV IVDLVERCRS 60
61 NQKKLMQMLT STGDDELLGR GLDLNDSLQI LLAKHDAIAS GSPLPVQASG SPLSVQASKP 120
121 ADSSPKSSEA KDSSSIAGSS SPIPATVSTG KSPIDEEYEE EEDEFAQLAR RHSKPPASVT 180
181 TDPTSLE
|
| Detection Method: | |
| Confidence: | 14.045757 |
| Match: | 1wrdA |
| Description: | Crystal structure of Tom1 GAT domain in complex with ubiquitin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [405-482] |
1 11 21 31 41 51
| | | | | |
1 SHNAASNALA LALPDPPPPV NTTKEQDMID LLSITLCTPS TPPAPSSQPS PPPPAGSDQN 60
61 THIYPQPQPR FDSYVAPW
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [483-671] |
1 11 21 31 41 51
| | | | | |
1 AQQQQPQQPQ AQQGYSQHQQ HQQQQGYSQP QHSQQQQGYS QLQQPQPQQG YSQSQPQAQV 60
61 QMQPSTRPQN PYEYPPPPWA STSANAYYTP RANASASYTD TSALAGRSLQ QSNSFPTRAG 120
121 DPQATSTASN SGVSVGQKPF VPSYRLFEDL DVFGSADGKH NKPANSSNGS QNLSGSQTQQ 180
181 SMIGGRKMI
|
| Detection Method: | |
| Confidence: | 6.69897 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
|
