| Protein: | HFA7A_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 272 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HFA7A_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
250.0 | [0..2] | [265..1] |
|
Region A: Residues: [1-129] |
1 11 21 31 41 51
| | | | | |
1 MMNPFLPEGC DPPPPPQPME GLHENAPPPF LTKTFEMVDD PNTDHIVSWN RGGTSFVVWD 60
61 LHSFSTILLP RHFKHSNFSS FIRQLNTYGF RKIEAERWEF ANEEFLLGQR QLLKNIKRRN 120
121 PFTPSSSPS
|
| Detection Method: |  |
| Confidence: | 28.69897 |
| Match: | 1hksA |
| Description: | SOLUTION STRUCTURE OF THE DNA-BINDING DOMAIN OF DROSOPHILA HEAT SHOCK TRANSCRIPTION FACTOR |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.835523092977445 | bayes_pls_golite062009 |
| transcription regulator activity | 0.4843036104266 | bayes_pls_golite062009 |
| nucleic acid binding | 0.37117756729668 | bayes_pls_golite062009 |
| DNA binding | 0.3118855114645 | bayes_pls_golite062009 |
|
Region A: Residues: [130-272] |
1 11 21 31 41 51
| | | | | |
1 HDACNELRRE KQVLMMEIVS LRQQQQTTKS YIKAMEQRIE GTERKQRQMM SFLARAMQSP 60
61 SFLHQLLKQR DKKIKELEDN ESAKRKRGSS SMSELEVLAL EMQGHGKQRN MLEEEDHQLV 120
121 VERELDDGFW EELLSDESLA STS
|
| Detection Method: | |
| Confidence: | 1.06 |
| Match: | 1m1jC |
| Description: | Fibrinogen C-terminal domains; Fibrinogen gamma chain |
Matching Structure (courtesy of the PDB): |
|
