| Protein: | RDR1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 1107 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RDR1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
1535.0 | [0..1] | [1107..1] |
|
Region A: Residues: [1-158] |
1 11 21 31 41 51
| | | | | |
1 MGKTIQVFGF PNGVSAEEVK KFLERLTGSG TVYAIKVRQP KKGGPRVYAI VQFTSERHTR 60
61 LIITAAAERL YYGRSYLKAF EVEQDIVPKP RASLHTISGL KMFFGCQVST KKFLTLWSAQ 120
121 DVCVSFGIGM RKLHFSFSWY QKDYRLELSY ENIWQIDL
|
| Detection Method: |  |
| Confidence: | 8.045757 |
| Match: | 2g4bA |
| Description: | No description for 2g4bA was found. |
|
Region A: Residues: [159-332] |
1 11 21 31 41 51
| | | | | |
1 HSPQGRSSKF LVIQVIGAPK IFEKEDQPIN LLFGIMDFYS DGSDEQWIRT TDFTSSSCIG 60
61 QSTAFCLELP VHLNVPDFRE NFANYAEHRA SSFLIESGSS YSSNANTLVP VVDPPPGFSL 120
121 PFEILFKLNT LVQNACLSGP ALDLDFYRLL NQKKYDRALI DHCLEKLFHL GECC
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [333-1107] |
1 11 21 31 41 51
| | | | | |
1 YEPAHWLRDE YKKWISKGKL PLSPTISLDD GLVYMYRVQV TPARVYFSGP EVNVSNRVLR 60
61 HYSKYINNFL RVSFVDEDLE KVRSMDLSPR SSTQRRTKLY DRIYSVLRDG IVIGDKKFEF 120
121 LAFSSSQLRE NSAWMFAPID RITAAHIRAW MGDFDHIRNV AKYAARLGQS FSSSRETLNV 180
181 RSDEIEVIPD VEIISLGTRY VFSDGIGKIS AEFARKVARK CGLTEFSPSA FQIRYGGYKG 240
241 VVAVDPNSSK KLSLRKSMSK FESENTKLDV LAWSKYQPCY MNRQLITLLS TLGVTDSVFE 300
301 KKQREVVDRL DAILTHPLEA HEALGLMAPG ENTNILKALI LCGYKPDAEP FLSMMLQNFR 360
361 ASKLLELRTK TRIFISGGRS MMGCLDETRT LEYGQVVVQY SDPMRPGRRF IITGPVVVAK 420
421 NPCLHPGDVR VLQAVNVPAL NHMVDCVVFP QKGLRPHPNE CSGSDLDGDI YFVCWDQELV 480
481 PPRTSEPMDY TPEPTQILDH DVTIEEVEEY FANYIVNDSL GIIANAHTAF ADKEPLKAFS 540
541 DPCIELAKKF STAVDFPKTG VAAVIPQHLY VKEYPDFMEK PDKPTYESKN VIGKLFREVK 600
601 ERAPPLISIK SFTLDVASKS YDKDMEVDGF EEYVDEAFYQ KANYDFKLGN LMDYYGIKTE 660
661 AEILSGGIMR MSKSFTKRRD AESIGRAVRA LRKETLSLFN ASEEEENESA KASAWYHVTY 720
721 HSSYWGLYNE GLNRDHFLSF AWCVYDKLVR IKKTNLGRRQ RQETLERLDH VLRFG
|
| Detection Method: | |
| Confidence: | 159.0 |
| Match: | 2j7nA |
| Description: | No description for 2j7nA was found. |
