| Protein: | SYHM_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 486 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SYHM_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
307.0 | [0..2] | [484..181] |
|
Region A: Residues: [1-65] |
1 11 21 31 41 51
| | | | | |
1 MRAIHIVTTR LSSSFRPILL LDLVSSCSPP RQFSIPRRLI CAAANGGGRS GSIVAPLVTE 60
61 EDFHK
|
| Detection Method: |  |
| Confidence: | 36.69897 |
| Match: | 2dq3A |
| Description: | No description for 2dq3A was found. |
|
Region A: Residues: [66-486] |
1 11 21 31 41 51
| | | | | |
1 KIDVNPPKGT RDFPPEDMRL RNWLFNHFKE VSRLYGYEEV DYPVLETEAL FIRKAGEEIR 60
61 DQLYCFEDRG NRRVALRPEL TPSLARLVIQ KGKSVSLPLK WFAIGQCWRY ERMTRGRRRE 120
121 HYQWNMDIIG VPQVTAEAEL ISSIVTFFKR IGITASDVGF KVSSRKVLQE LLKKYGVPED 180
181 LFGRVCIIID KIEKIPIDEI KKELGFTGIS EDAIEQLLQV LSVKSLDDLE DIIGGAGEAI 240
241 ADLKQLFSLA EKFGYSEWIQ FDASVVRGLA YYTGIVFEGF DRKGKLRAIC GGGRYDRLLS 300
301 TYGGDDFPAC GFGFGDAVIV ELLKEKDLLP ELGQEVENIV CALDKDLQGA AATVATALRD 360
361 KGQTVDLVLE SKPLKWVFKR AARVNARRLV LVGKTEWEDG SVSVKVLSSG EQFQVKLSDL 420
421 E
|
| Detection Method: | |
| Confidence: | 56.0 |
| Match: | 1wu7A |
| Description: | Crystal structure of histidyl-tRNA synthetase from Thermoplasma acidophilum |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ligase activity, forming carbon-oxygen bonds | 7.89468709683036 | bayes_pls_golite062009 |
| ligase activity, forming aminoacyl-tRNA and related compounds | 7.89468709683036 | bayes_pls_golite062009 |
| aminoacyl-tRNA ligase activity | 7.88410036819636 | bayes_pls_golite062009 |
| ligase activity | 6.92073480193262 | bayes_pls_golite062009 |
| histidine-tRNA ligase activity | 5.91343220471745 | bayes_pls_golite062009 |
| phenylalanine-tRNA ligase activity | 2.76416144738864 | bayes_pls_golite062009 |
| threonine-tRNA ligase activity | 2.18642354927 | bayes_pls_golite062009 |
| glycine-tRNA ligase activity | 2.17047432052132 | bayes_pls_golite062009 |
| serine-tRNA ligase activity | 2.07594942154162 | bayes_pls_golite062009 |
| catalytic activity | 1.99372273395202 | bayes_pls_golite062009 |
| alanine-tRNA ligase activity | 1.82594054955281 | bayes_pls_golite062009 |
| lysine-tRNA ligase activity | 1.72324031407565 | bayes_pls_golite062009 |
| asparagine-tRNA ligase activity | 0.921492123574877 | bayes_pls_golite062009 |
| binding | 0.311307565529325 | bayes_pls_golite062009 |
| aspartate-tRNA ligase activity | 0.00572514744734753 | bayes_pls_golite062009 |
