| Protein: | CDC21_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 457 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CDC21_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
497.0 | [0..2] | [454..1189] |
|
|
484.0 | [0..2] | [455..1145] |
|
|
472.0 | [0..2] | [454..627] |
|
|
468.0 | [0..2] | [445..1049] |
|
|
466.0 | [0..2] | [454..1012] |
|
|
456.0 | [0..1] | [456..766] |
|
Region A: Residues: [1-119] |
1 11 21 31 41 51
| | | | | |
1 MDAGMNNTSS HYKTQARCPL QEHFLPRKPS KENLDRFIPN RSAMNFDYAH FALTEGRKGK 60
61 DQTAAVSSPS KEAYRKQLAE TMNLNHTRIL AFRNKPQAPV ELLPSNHSAS LHQQPKSVK
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.250 | a.29.16 | Description not found. |
| View | Download | 0.211 | a.77.1 | DEATH domain |
| View | Download | 0.209 | a.29.16 | Description not found. |
| View | Download | 0.204 | a.4.12 | TrpR-like |
|
Region A: Residues: [120-457] |
1 11 21 31 41 51
| | | | | |
1 PRRYIPQTSE RTLDAPDIVD DFYLNLLDWG SANVLAIALD HTVYLWDAST GSTSELVTID 60
61 EEKGPVTSIN WAPDGRHVAV GLNNSEVQLW DSASNRQLRT LKGGHQSRVG SLAWNNHILT 120
121 TGGMDGLIIN NDVRIRSPIV ETYRGHTQEV CGLKWSGSGQ QLASGGNDNV VHIWDRSVAS 180
181 SNSTTQWLHR LEEHTSAVKA LAWCPFQANL LATGGGGGDR TIKFWNTHTG ACLNSVDTGS 240
241 QVCSLLWSKN ERELLSSHGF TQNQLTLWKY PSMVKMAELT GHTSRVLYMA QSPDGCTVAS 300
301 AAGDETLRFW NVFGVPETAK KAAPKAVSEP FSHVNRIR
|
| Detection Method: | |
| Confidence: | 72.69897 |
| Match: | 1vyhC |
| Description: | PAF-AH Holoenzyme: Lis1/Alfa2 |
Matching Structure (courtesy of the PDB): |
|
