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View Structure Prediction Details

Protein: ACR12_ARATH
Organism: Arabidopsis thaliana
Length: 301 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ACR12_ARATH.

Description E-value Query
Range
Subject
Range
GLND_AZOVI - Bifunctional uridylyltransferase/uridylyl-removing enzyme OS=Azotobacter vinelandii GN=glnD PE=1 SV=...
GLND_AZOVD - Bifunctional uridylyltransferase/uridylyl-removing enzyme OS=Azotobacter vinelandii (strain DJ / ATC...
227.0 [0..15] [301..608]

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Predicted Domain #1
Region A:
Residues: [1-105]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFSSSIFSV TQFSSSLASR PSSAISRQTR FPAQIASPDL SPALFDDRRK FVGGVMSLLT  60
   61 KSIKNRVYAS INSIDSAATP SYPKSEDDDD VVPMPMVMID QDADP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [106-301]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EATIVQLSFG NRLGALIDTM RALKDLGLDV IKGTVSTEGS IKQTKFSITK RDTGRKVEDP  60
   61 DLLEQIRLTI INNLLKYHPE CSEQLAMGET FGIKAPEKKI DVDIATHIHV KEDGPKRSLL 120
  121 VIETADRPGL VVEMIKVMAD VNIDVESAEI DTEGLVAKDK FHVSYQGQAL NRSLSQVLVN 180
  181 CLRYFLRRPE TDIDSY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 17.221849
Match: 1u8sA
Description: Crystal structure of putative glycine cleavage system transcriptional repressor
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.115197515122073 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle