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View Structure Prediction Details

Protein: ACR12_ARATH
Organism: Arabidopsis thaliana
Length: 301 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ACR12_ARATH.

Description E-value Query
Range
Subject
Range
GLND_AZOVI - Bifunctional uridylyltransferase/uridylyl-removing enzyme OS=Azotobacter vinelandii GN=glnD PE=1 SV=...
GLND_AZOVD - Bifunctional uridylyltransferase/uridylyl-removing enzyme OS=Azotobacter vinelandii (strain DJ / ATC...
227.0 [0..15] [301..608]

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Predicted Domain #1
Region A:
Residues: [1-105]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFSSSIFSV TQFSSSLASR PSSAISRQTR FPAQIASPDL SPALFDDRRK FVGGVMSLLT  60
   61 KSIKNRVYAS INSIDSAATP SYPKSEDDDD VVPMPMVMID QDADP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [106-301]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EATIVQLSFG NRLGALIDTM RALKDLGLDV IKGTVSTEGS IKQTKFSITK RDTGRKVEDP  60
   61 DLLEQIRLTI INNLLKYHPE CSEQLAMGET FGIKAPEKKI DVDIATHIHV KEDGPKRSLL 120
  121 VIETADRPGL VVEMIKVMAD VNIDVESAEI DTEGLVAKDK FHVSYQGQAL NRSLSQVLVN 180
  181 CLRYFLRRPE TDIDSY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 17.221849
Match: 1u8sA
Description: Crystal structure of putative glycine cleavage system transcriptional repressor
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.115197515122073 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle