| Protein: | MBD7_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 306 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MBD7_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
258.0 | [0..1] | [259..10] |
|
Region A: Residues: [1-119] |
1 11 21 31 41 51
| | | | | |
1 MQTRSSSSPS ANHRRETQLQ IADPTSFCGK IMPGWTVVNR PRSSNNGVVD TYFIEPGTGR 60
61 QFSSLEAIHR HLAGEVNDRR LTRAGSFFQD KTRVYEGSRT KQDHCGVEYA SKGFRLPRG
|
| Detection Method: |  |
| Confidence: | 20.522879 |
| Match: | 1ub1A |
| Description: | Solution structure of the matrix attachment region-binding domain of chicken MeCP2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.339357445627225 | bayes_pls_golite062009 |
|
Region A: Residues: [120-306] |
1 11 21 31 41 51
| | | | | |
1 WSVEEVPRKN SHYIDKYYVE RKTGKRFRSL VSVERYLRES RNSIEQQLRV LQNRRGHSKD 60
61 FRLPDGWIVE EKPRRSSSHI DRSYIEPGTG NKFRSMAAVE RYLISVGNIT LDSVSMVHSE 120
121 RLPLLMNRNG IRFQSEVIDP NPPKKVKWVL TGSGGNMFTA NVRGSNVSSL VKHTWSEAFV 180
181 SLIEDRS
|
| Detection Method: | |
| Confidence: | 2.5 |
| Match: | 1ub1A |
| Description: | Solution structure of the matrix attachment region-binding domain of chicken MeCP2 |
| Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.236830846471166 | bayes_pls_golite062009 |
