| Protein: | C3H21_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 371 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for C3H21_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
423.0 | [0..1] | [369..1] |
|
|
422.0 | [0..20] | [369..58] |
|
|
420.0 | [0..1] | [369..1] |
|
|
413.0 | [0..1] | [369..1] |
|
Region A: Residues: [1-77] |
1 11 21 31 41 51
| | | | | |
1 MPPKQQPKAD LAKKQKQVED KTFGLKNKNK SKNVQKYVQS LKQSVQPKPD ATKAAAKKKK 60
61 EEEKAREQEL NELFKVA
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.806 | N/A | N/A | a.37.1 | A DNA-binding domain in eukaryotic transcription factors |
|
Region A: Residues: [78-279] |
1 11 21 31 41 51
| | | | | |
1 ISQPKVPVGV DPKSILCEFF KAGQCQKGFK CKFSHDLNIQ RKGEKIDIYS DTRDEDGDMD 60
61 EWDQETLEKV VESKKNEYNQ NKPTDIVCKY FLDAVEKKQY GWFWSCPNGG KECHYRHALP 120
121 PGYVLKSQMK ALLEEESSKK LAVEDEIENE RAKLQTATQM TPALFMEWKR KKIAERDAGL 180
181 AASQAERAKN DRMSGRELFL SN
|
| Detection Method: | |
| Confidence: | 2.18 |
| Match: | 2cqeA |
| Description: | Solution Structure of the Zinc-finger domain in KIAA1064 protein |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [280-371] |
1 11 21 31 41 51
| | | | | |
1 ASLFVDDAEA CEEYEREREQ EETEQKAKNK EAEAGTSKSS GDAEQSSKEV NEEEEDDDDD 60
61 DDDLDMDELD ELEASLSKTS IQIREPNDEG SS
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
