| Protein: | C3H21_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 371 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for C3H21_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
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423.0 | [0..1] | [369..1] |
|
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422.0 | [0..20] | [369..58] |
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420.0 | [0..1] | [369..1] |
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413.0 | [0..1] | [369..1] |
|
Region A: Residues: [1-77] |
1 11 21 31 41 51
| | | | | |
1 MPPKQQPKAD LAKKQKQVED KTFGLKNKNK SKNVQKYVQS LKQSVQPKPD ATKAAAKKKK 60
61 EEEKAREQEL NELFKVA
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.806 | N/A | N/A | a.37.1 | A DNA-binding domain in eukaryotic transcription factors |
| View | Download | 0.806 | N/A | N/A | a.37.1 | A DNA-binding domain in eukaryotic transcription factors |
| View | Download | 0.555 | N/A | N/A | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.549 | N/A | N/A | d.101.1 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domains 2 and 5 |
| View | Download | 0.540 | N/A | N/A | f.17.1 | F1F0 ATP synthase subunit C |
| View | Download | 0.539 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.522 | N/A | N/A | a.46.1 | Methionine synthase domain |
| View | Download | 0.520 | N/A | N/A | f.17.1 | F1F0 ATP synthase subunit C |
| View | Download | 0.484 | N/A | N/A | a.130.1 | Chorismate mutase II |
| View | Download | 0.483 | N/A | N/A | d.222.1 | YbaB-like |
|
Region A: Residues: [78-279] |
1 11 21 31 41 51
| | | | | |
1 ISQPKVPVGV DPKSILCEFF KAGQCQKGFK CKFSHDLNIQ RKGEKIDIYS DTRDEDGDMD 60
61 EWDQETLEKV VESKKNEYNQ NKPTDIVCKY FLDAVEKKQY GWFWSCPNGG KECHYRHALP 120
121 PGYVLKSQMK ALLEEESSKK LAVEDEIENE RAKLQTATQM TPALFMEWKR KKIAERDAGL 180
181 AASQAERAKN DRMSGRELFL SN
|
| Detection Method: | |
| Confidence: | 2.18 |
| Match: | 2cqeA |
| Description: | Solution Structure of the Zinc-finger domain in KIAA1064 protein |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [280-371] |
1 11 21 31 41 51
| | | | | |
1 ASLFVDDAEA CEEYEREREQ EETEQKAKNK EAEAGTSKSS GDAEQSSKEV NEEEEDDDDD 60
61 DDDLDMDELD ELEASLSKTS IQIREPNDEG SS
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.267 | N/A | N/A | d.58.5 | GlnB-like |
| View | Download | 0.231 | N/A | N/A | a.43.1 | Met repressor-like |
| View | Download | 0.203 | N/A | N/A | d.52.2 | GMP synthetase C-terminal dimerisation domain |
| View | Download | 0.203 | N/A | N/A | d.52.2 | GMP synthetase C-terminal dimerisation domain |
