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View Structure Prediction Details

Protein: NAT6_ARATH
Organism: Arabidopsis thaliana
Length: 532 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NAT6_ARATH.

Description E-value Query
Range
Subject
Range
gi|218191553 - gi|218191553|gb|EEC73980.1| hypothetical protein OsI_08888 [Oryza sativa Indica Group]
gi|222623655, gi... - gi|50912631|ref|XP_467723.1| putative permease 1 [Oryza sativa (japonica cultivar-group)], gi|463903...
321.0 [0..10] [532..16]

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Predicted Domain #1
Region A:
Residues: [1-190]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGGGAPAPK ADEPQPHPPK DQLPNISYCI TSPPPWPEAI LLGFQHYLVM LGTTVLIPTA  60
   61 LVPQMGGGYE EKAKVIQTIL FVAGINTLLQ TLFGTRLPAV VGASYTFVPT TISIILSGRF 120
  121 SDTSNPIDRF ERIMRATQGA LIVASTLQMI LGFSGLWRNV VRFLSPISAV PLVGLVGFGL 180
  181 YEFGFPGVAK 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [191-317]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CIEIGLPELL ILVFVSQYLP HVIKSGKNVF DRFAVIFAVV IVWIYAHLLT VGGAYNGAAP  60
   61 TTQTSCRTDR AGIIGAAPWI RVPWPFQWGA PSFDAGEAFA MMMASFVALV ESTGAFVAVS 120
  121 RYASATM

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [318-532]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LPPSILSRGI GWQGVAILIS GLFGTGAGSS VSVENAGLLA LTRVGSRRVV QIAAGFMIFF  60
   61 SILGKFGAVF ASIPAPIIAA LYCLFFAYVG AGGLSFLQFC NLNSFRTKFI LGFSVFLGLS 120
  121 IPQYFNEYTA IKGYGPVHTG ARWFNDMVNV PFSSEPFVAG SVAFFLDNTL HKKDSSIRKD 180
  181 RGKHWWDKFR SFKGDTRSEE FYSLPFNLNK YFPSV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle