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View Structure Prediction Details

Protein: NAT6_ARATH
Organism: Arabidopsis thaliana
Length: 532 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NAT6_ARATH.

Description E-value Query
Range
Subject
Range
gi|218191553 - gi|218191553|gb|EEC73980.1| hypothetical protein OsI_08888 [Oryza sativa Indica Group]
gi|222623655, gi... - gi|50912631|ref|XP_467723.1| putative permease 1 [Oryza sativa (japonica cultivar-group)], gi|463903...
321.0 [0..10] [532..16]

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Predicted Domain #1
Region A:
Residues: [1-190]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGGGAPAPK ADEPQPHPPK DQLPNISYCI TSPPPWPEAI LLGFQHYLVM LGTTVLIPTA  60
   61 LVPQMGGGYE EKAKVIQTIL FVAGINTLLQ TLFGTRLPAV VGASYTFVPT TISIILSGRF 120
  121 SDTSNPIDRF ERIMRATQGA LIVASTLQMI LGFSGLWRNV VRFLSPISAV PLVGLVGFGL 180
  181 YEFGFPGVAK 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [191-317]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CIEIGLPELL ILVFVSQYLP HVIKSGKNVF DRFAVIFAVV IVWIYAHLLT VGGAYNGAAP  60
   61 TTQTSCRTDR AGIIGAAPWI RVPWPFQWGA PSFDAGEAFA MMMASFVALV ESTGAFVAVS 120
  121 RYASATM

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [318-532]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LPPSILSRGI GWQGVAILIS GLFGTGAGSS VSVENAGLLA LTRVGSRRVV QIAAGFMIFF  60
   61 SILGKFGAVF ASIPAPIIAA LYCLFFAYVG AGGLSFLQFC NLNSFRTKFI LGFSVFLGLS 120
  121 IPQYFNEYTA IKGYGPVHTG ARWFNDMVNV PFSSEPFVAG SVAFFLDNTL HKKDSSIRKD 180
  181 RGKHWWDKFR SFKGDTRSEE FYSLPFNLNK YFPSV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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Created and Maintained by: Michael Riffle