| Protein: | gi|25406340, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 753 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|25406340, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
565.0 | [0..193] | [682..34] |
|
|
564.0 | [0..193] | [682..34] |
|
|
561.0 | [0..193] | [682..34] |
|
|
561.0 | [0..193] | [682..34] |
|
|
560.0 | [0..192] | [682..6] |
|
|
558.0 | [0..193] | [682..34] |
|
|
555.0 | [0..193] | [682..7] |
|
|
554.0 | [0..193] | [686..7] |
|
|
554.0 | [0..193] | [682..34] |
|
Region A: Residues: [1-398] |
1 11 21 31 41 51
| | | | | |
1 MASKETGMFS LAGELASLVE ESSSHVDDDS KPRSRMELKR SLELRLKKRV KEQCINGKFS 60
61 DLLKKVIARP ETLRDAYDCI RLNSNVSITE RNGSVAFDSI AEELSSGVFD VASNTFSIVA 120
121 RDKTKEVLVL PSVALKVVQE AIRIVLEVVF SPHFSKISHS CRSGRGRASA LKYINNNISR 180
181 SDWCFTLSLN KKLDVSVFEN LLSVMEEKVE DSSLSILLRS MFEARVLNLE FGGFPKGHGL 240
241 PQEGVLSRVL MNIYLDRFDH EFYRISMRHE ALGLDSKTDE DSPGSKLRSW FRRQAGEQGL 300
301 KSTTEQDVAL RVYCCRFMDE IYFSVSGPKK VASDIRSEAI GFLRNSLHLD ITDETDPSPC 360
361 EATSGLRVLG TLVRKNVRES PTVKAVHKLK EKVRLFAL
|
| Detection Method: |  |
| Confidence: | 2.14 |
| Match: | 1xr7A |
| Description: | Crystal structure of RNA-dependent RNA Polymerase 3D from human rhinovirus serotype 16 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [399-523] |
1 11 21 31 41 51
| | | | | |
1 QKEEAWTLGT VRIGKKWLGH GLKKVKESEI KGLADSNSTL SQISCHRKAG METDHWYKIL 60
61 LRIWMEDVLR TSADRSEEFV LSKHVVEPTV PQELRDAFYK FQNAAAAYVS SETANLEALL 120
121 PCPQS
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.648 | d.54.1 | Enolase N-terminal domain-like |
| View | Download | 0.628 | d.54.1 | Enolase N-terminal domain-like |
| View | Download | 0.606 | d.54.1 | Enolase N-terminal domain-like |
| View | Download | 0.606 | d.54.1 | Enolase N-terminal domain-like |
| View | Download | 0.542 | g.39.1 | Glucocorticoid receptor-like (DNA-binding domain) |
| View | Download | 0.528 | d.54.1 | Enolase N-terminal domain-like |
| View | Download | 0.422 | d.54.1 | Enolase N-terminal domain-like |
| View | Download | 0.342 | a.29.2 | Bromodomain |
| View | Download | 0.330 | d.150.1 | 4'-phosphopantetheinyl transferase |
| View | Download | 0.330 | d.150.1 | 4'-phosphopantetheinyl transferase |
| View | Download | 0.272 | d.108.1 | Acyl-CoA N-acyltransferases (Nat) |
| View | Download | 0.242 | d.118.1 | N-acetylmuramoyl-L-alanine amidase-like |
| View | Download | 0.207 | d.54.1 | Enolase N-terminal domain-like |
|
Region A: Residues: [524-753] |
1 11 21 31 41 51
| | | | | |
1 HDRPVFFGDV VAPTNAIGRR LYRYGLITAK GYARSNSMLI LLDTAQIIDW YSGLVRRWVI 60
61 WYEGCSNFDE IKALIDNQIR MSCIRTLAAK YRIHENEIEK RLDLELSTIP SAEDIEQEIQ 120
121 HEKLDSPAFD RDEHLTYGLS NSGLCLLSLA RLVSESRPCN CFVIGCSMAA PAVYTLHAME 180
181 RQKFPGWKTG FSVCIPSSLN GRRIGLCKQH LKDLYIGQIS LQAVDFGAWR
|
| Detection Method: | |
| Confidence: | 5.958607 |
| Match: | PF01348.12 |
| Description: | No description for PF01348.12 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
