| Protein: | RAX2_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 298 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RAX2_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
250.0 | [0..1] | [298..1] |
|
Region A: Residues: [1-142] |
1 11 21 31 41 51
| | | | | |
1 MGRAPCCDKA NVKRGPWSPE EDAKLKDYIE KQGTGGNWIA LPHKAGLRRC GKSCRLRWLN 60
61 YLRPNIRHGD FTEEEDNIIY SLFASIGSRW SVIAAHLQGR TDNDIKNYWN TKLKKKLIAT 120
121 MAPPPHHHLA IATSSSSASP SS
|
| Detection Method: |  |
| Confidence: | 41.0 |
| Match: | 1h88C |
| Description: | c-Myb, DNA-binding domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.334577365229545 | bayes_pls_golite062009 |
| transcription regulator activity | 0.0696342306231097 | bayes_pls_golite062009 |
|
Region A: Residues: [143-298] |
1 11 21 31 41 51
| | | | | |
1 SSHYNMINSL LPYNPSTNQL LTPHQGIMMT MMGQQQQLFY QEDMGNLVNS PNRNNLIMSH 60
61 QEDNQEQSTN KGIMLLSDVR SGSSTTSTVT RVKMEHRDHD DHHHHHEEDE RSMTSVVMED 120
121 YGMEEIKQLI SSSCTSSNNS LWFDENKTED KFMLYY
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.674 | N/A | N/A | b.22.1 | TNF-like |
| View | Download | 0.403 | N/A | N/A | c.23.5 | Flavoproteins |
| View | Download | 0.338 | N/A | N/A | a.79.1 | Antitermination factor NusB |
| View | Download | 0.317 | N/A | N/A | f.7.1 | Lipovitellin-phosvitin complex; beta-sheet shell regions |
| View | Download | 0.302 | N/A | N/A | d.134.1 | Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 |
