| Protein: | STIP1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 849 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for STIP1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
517.0 | [0..6] | [841..10] |
|
|
515.0 | [0..15] | [841..23] |
|
|
515.0 | [0..15] | [841..23] |
|
|
514.0 | [0..15] | [841..23] |
|
|
514.0 | [0..15] | [841..23] |
|
|
511.0 | [0..4] | [841..7] |
|
|
508.0 | [0..4] | [841..7] |
|
Region A: Residues: [1-411] |
1 11 21 31 41 51
| | | | | |
1 MDEYQDMERF SMDNDYEGGR WEGDEFVYQK RKEKRKQTKN DATYGIFAES DSDSDDSGGG 60
61 GSRRKRRKDR DSGRKADLTK PVNFVSTGTV MPNQEIDKDS REHNDEKDRD KIEDNDMIDE 120
121 DVEVRGGLGI GSSGLGLGFN ANGFDDEDNL LPGALGKKIA DRAKMRGKAK VEKRGQEGGG 180
181 AKGGKKNTLG SDIGQFEKST KGIGMKLLEK MGYKGGGLGK NQQGIVAPIE AQLRPKNMGM 240
241 GYNDFKEAKL PDLKKVEEKK IIGVSVSENE QSHGDRGGKN LWKKKKVRKA VYVTAEELLE 300
301 KKQEAGFGGG QTIIDMRGPQ VRVVTNLENL DAEEKAKEAD VPMPELQHNL RLIVDLVEHE 360
361 IQKIDRDLRN ERESALSLQQ EKEMLINEEE KQKRHLENME YIADEISRIE L
|
| Detection Method: |  |
| Confidence: | 13.221849 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [412-494] |
1 11 21 31 41 51
| | | | | |
1 ENTSGNLTLD SLAIRFEDLQ TSYPDDYKLC SLSTIACSLA LPLFIRMFQG WDPLSDAVHG 60
61 LKAISSWRKL LEVEEDHNIW VVS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [495-572] |
1 11 21 31 41 51
| | | | | |
1 TPYSQLVSEV VLPAVRIAGI NTWEPRDPEP MLRFLETWET LLPSSVLQTI LDTVVLPKLS 60
61 TAVEYWDPRR ELVAIHVW
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [573-671] |
1 11 21 31 41 51
| | | | | |
1 VHPWLPILGQ KLEFLYQIIQ MKLSNVLDAW HPSDSSAYTI LSPWKTVFDT TSWEQLMRRY 60
61 IVPKLQLALQ EFQVNPANQN LERFDWVMKW ASAVPIHLM
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [672-849] |
1 11 21 31 41 51
| | | | | |
1 ADMMERFFFP KWLDVLYHWL RAKPRFEEIQ GWYYGWKELF PQELTANERI RIQLKRGLDM 60
61 LMEAVEGVEV SQPRAKANER TQSVPAQAQA QAKAQMDSTE VLSLKEVLEV FAQEQELLFK 120
121 PKPNRMHNGL QIYGFGNVSV IIDSVNQKLL AQKDGGWFLV TPDDLLRMHN NTTVSAKR
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
