| Protein: | TET12_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 264 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TET12_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
235.0 | [0..2] | [262..3] |
|
Region A: Residues: [1-264] |
1 11 21 31 41 51
| | | | | |
1 MLRLSNAAVI TTNAILALIG LAALSFSVYV YVQGPSQCQR FVQNPLIVTA ALLFFISSLG 60
61 LIAALYGSHI IITLYLFFLF LSILLLLVLS VFIFLVTNPT AGKALSGRGI GNVKTGDYQN 120
121 WIGNHFLRGK NWEGITKCLS DSRVCKRFGP RDIDFDSKHL SNVQFGCCRP PVECGFESKN 180
181 ATWWTVPATA TTAIIGDCKA WSNTQRQLCY ACESCKIGVL KGIRKRWRIL IVVNLLLILL 240
241 VVFLYSCGCC VRKNNRVPWK RRFF
|
| Detection Method: |  |
| Confidence: | 1.25 |
| Match: | 1oedE |
| Description: | Acetylcholine receptor protein, gamma chain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transporter activity | 0.490530350426558 | bayes_pls_golite062009 |
| transmembrane transporter activity | 0.470369925890019 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.296558094949252 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.270278407554454 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 0.236415535327918 | bayes_pls_golite062009 |
| channel activity | 0.219732635042021 | bayes_pls_golite062009 |
| passive transmembrane transporter activity | 0.219732635042021 | bayes_pls_golite062009 |
| binding | 0.136398313410002 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 0.0891259397854478 | bayes_pls_golite062009 |
| substrate-specific channel activity | 0.0809952490788071 | bayes_pls_golite062009 |
| ion channel activity | 0.0676313321342619 | bayes_pls_golite062009 |
| metal ion transmembrane transporter activity | 0.00152349218944181 | bayes_pls_golite062009 |
