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View Structure Prediction Details

Protein: VDAC2_ARATH
Organism: Arabidopsis thaliana
Length: 276 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for VDAC2_ARATH.

Description E-value Query
Range
Subject
Range
gi|5031279 - gi|5031279|gb|AAD38145.1|AF139498_1 porin [Prunus armeniaca]
334.0 [0..1] [276..1]

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Predicted Domain #1
Region A:
Residues: [1-98]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKGPGLFTD IGKKAKDLLT RDYNSDQKFS ISTYSASGVA LTSTALKKGG VHAADVATQY  60
   61 KYKNALFDVK IDTDSSVLTT VTLTEILPST KAIASFKV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [99-276]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PDYNSAKLEV QYFHDHATVT AAAALKQNPL IDITATLGSP VISFGAEAGY DTTSKTFTKY  60
   61 NAGISVTKPD ACLSIILGDK GDSLKASYLH HFDEFKRTAA VGEVYRKFST NENTITVGGL 120
  121 YAIDHSTAVK AKLNNHGTLG ALLQHEVLPR SLVTVSSEID TKALEKHPRF GLSLALKP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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