| Protein: | SRF7_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 717 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SRF7_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
415.0 | [0..4] | [710..165] |
|
Region A: Residues: [1-293] |
1 11 21 31 41 51
| | | | | |
1 MTENRVVLAL LILCIVGFEP SFIHGATDSS DTSALNIMFS SMNSPGQLSQ WTASGGDPCG 60
61 QNWKGITCSG SRVTQIKLPS LGLSGSLGFM LDKLTSVTEF DMSNNNLGGD LPYQLPPNLE 120
121 RLNLANNQFT GSAQYSISMM APLKYLNLAH NQLKQLAIDF TKLTSLSILD LSSNAFIGSL 180
181 PNTCSSLTSA KSIYLQNNQF SGTIDILATL PLENLNIANN RFTGWIPDSL KGINLQKDGN 240
241 LLNSGPAPPP PPGTPPISKS SPTPKSGNRG NRSNGDSSNS KDSSKSGLGA GGV
|
| Detection Method: |  |
| Confidence: | 15.045757 |
| Match: | 1ogqA |
| Description: | Polygalacturonase inhibiting protein PGIP |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| signal transducer activity | 2.54176035045352 | bayes_pls_golite062009 |
| molecular transducer activity | 2.54176035045352 | bayes_pls_golite062009 |
| receptor activity | 2.44108148686445 | bayes_pls_golite062009 |
| transmembrane receptor activity | 2.25077658159974 | bayes_pls_golite062009 |
| binding | 1.87302803330255 | bayes_pls_golite062009 |
| protein kinase activity | 1.43632437878638 | bayes_pls_golite062009 |
| nucleic acid binding | 1.17568458983071 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 1.16530645523007 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 1.12585418084562 | bayes_pls_golite062009 |
| kinase activity | 1.11577341189523 | bayes_pls_golite062009 |
| G-protein coupled receptor activity | 1.04507575991279 | bayes_pls_golite062009 |
| protein binding | 0.646159692466759 | bayes_pls_golite062009 |
| transferase activity | 0.435331931559158 | bayes_pls_golite062009 |
| protein tyrosine kinase activity | 0.231213253402712 | bayes_pls_golite062009 |
| enzyme regulator activity | 0.154501444195573 | bayes_pls_golite062009 |
|
Region A: Residues: [294-381] |
1 11 21 31 41 51
| | | | | |
1 AGIVISLIVV TAVIAFFLIK RKRSKRSSST DIEKTDNNIN QPIILASNDF HQENKSVQNP 60
61 PLVETKKLDT SLSMNLRPPP SERHKSFD
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [382-717] |
1 11 21 31 41 51
| | | | | |
1 DDDSTMRKPI VAKKAAVVVP SNVNTYTVSD LQVATNSFSV DNLLGEGTFG RVYRAQFEDG 60
61 KVLAVKKIDS SALPTDTADD FTEIVSKIAH LDHENVTKLD GYCSEHGQHL VVYEFHRNGS 120
121 LHDFLHLAEE ESKPLIWNPR VKIALGTARA LEYLHEVCSP SIVHKNIKSA NILLDSELNP 180
181 HLSDSGLASF LPTANELLNQ NDEGYSAPET SMSGQYSLKS DVYSFGVVML ELLTGRKPFD 240
241 STRSRSEQSL VRWATPQLHD IDALGKMVDP ALKGLYPVKS LSRFADVIAL CVQPEPEFRP 300
301 PMSEVVQALV VLVQRANMSK RTVGVGSGSS GVNDYM
|
| Detection Method: | |
| Confidence: | 68.69897 |
| Match: | 2qkwB |
| Description: | No description for 2qkwB was found. |
