| Protein: | TPP1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 340 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TPP1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
324.0 | [0..1] | [340..1] |
|
|
240.0 | [0..76] | [325..1] |
|
|
230.0 | [0..76] | [325..1] |
|
|
224.0 | [0..80] | [325..1] |
|
|
218.0 | [0..95] | [339..3] |
|
|
217.0 | [0..77] | [325..1] |
|
|
216.0 | [0..80] | [329..1] |
|
|
215.0 | [0..76] | [340..1] |
|
|
213.0 | [0..100] | [339..7] |
|
Region A: Residues: [1-143] |
1 11 21 31 41 51
| | | | | |
1 MAIRITFTYS THVARNLVGT RVGPGGYCFE SLVRPRFFSH KRDFDRSPRN RPASMYGSIA 60
61 RELIGEGSQS PLVMGLISIL KSTTGHESST MNVLGVSSFK ASSIIPFLQG SKWIKNPPVI 120
121 DDVDKGGTVC DDDDDKESRN GGS
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [144-233] |
1 11 21 31 41 51
| | | | | |
1 GWVNKLLSVC SEDAKAAFTA VTVSILFRSA LAEPKSIPST SMYPTLDKGD RVMAEKVSYF 60
61 FRKPEVSDIV IFKAPPILLE YPEYGYSSND
|
| Detection Method: | |
| Confidence: | 2.77 |
| Match: | 1t7dA |
| Description: | Crystal structure of Escherichia coli type I signal peptidase in complex with a lipopeptide inhibitor |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [234-340] |
1 11 21 31 41 51
| | | | | |
1 VFIKRIVASE GDWVEVRDGK LFVNDIVQEE DFVLEPMSYE MEPMFVPKGY VFVLGDNRNK 60
61 SFDSHNWGPL PIENIVGRSV FRYWPPSKVS DTIYHDQAIT RGPVAVS
|
| Detection Method: | |
| Confidence: | 20.30103 |
| Match: | 1b12A |
| Description: | Type 1 signal peptidase |
Matching Structure (courtesy of the PDB): |
|
