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View Structure Prediction Details

Protein: ERCC1_ARATH
Organism: Arabidopsis thaliana
Length: 410 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ERCC1_ARATH.

Description E-value Query
Range
Subject
Range
DNLJ_BURCM - DNA ligase OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=ligA PE=3 SV=1
328.0 [0..32] [409..296]

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Predicted Domain #1
Region A:
Residues: [1-410]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANEDDDGEK SRSLHQQIAR KPKTQIVIGV PSYQEVLESS QTKSTPPSLF KPSQSFSQAF  60
   61 AFVKSSDVYS PPPPSSAAAS SSQPSGASQV PHSSSQTHQT DGASSSSTPV ATGSVPSNTT 120
  121 QNRNAILVSH RQKGNPLLKH IRNVKWVFSD IIPDYVLGQN SCALYLSLRY HLLHPDYLYF 180
  181 RIRELQKNFK LSVVLCHVDV EDTVKPLLEV TKTALLHDCT LLCAWSMTEC ARYLETIKVY 240
  241 ENKPADLIQG QMDTDYLSRL NHSLTSIRHV NKSDVVTLGS TFGSLAHIID ASMEDLARCP 300
  301 GIGERKVKRL YDTFHEPFKR ATSSYPSVVE PPIPEAPVEK DVNSEEPVEE DEDFVEDSRK 360
  361 RKKKEPEPEK TVKTALSAVF ARYSDRLSKK KEKQKEKDTT TASDAETHQN 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 86.69897
Match: 2owoA
Description: No description for 2owoA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle