| Protein: | MYB44_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 305 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MYB44_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
298.0 | [0..1] | [305..1] |
|
Region A: Residues: [1-175] |
1 11 21 31 41 51
| | | | | |
1 MADRIKGPWS PEEDEQLRRL VVKYGPRNWT VISKSIPGRS GKSCRLRWCN QLSPQVEHRP 60
61 FSAEEDETIA RAHAQFGNKW ATIARLLNGR TDNAVKNHWN STLKRKCGGY DHRGYDGSED 120
121 HRPVKRSVSA GSPPVVTGLY MSPGSPTGSD VSDSSTIPIL PSVELFKPVP RPGAV
|
| Detection Method: |  |
| Confidence: | 37.30103 |
| Match: | 1a5jA |
| Description: | CHICKEN B-MYB DNA BINDING DOMAIN, REPEAT 2 AND REPEAT3, NMR, 32 STRUCTURES |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.334577365229545 | bayes_pls_golite062009 |
| transcription regulator activity | 0.0696342306231097 | bayes_pls_golite062009 |
|
Region A: Residues: [176-305] |
1 11 21 31 41 51
| | | | | |
1 VLPLPIETSS SSDDPPTSLS LSLPGADVSE ESNRSHESTN INNTTSSRHN HNNTVSFMPF 60
61 SGGFRGAIEE MGKSFPGNGG EFMAVVQEMI KAEVRSYMTE MQRNNGGGFV GGFIDNGMIP 120
121 MSQIGVGRIE
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.395 | a.24.4 | Hemerythrin |
| View | Download | 0.272 | a.118.14 | FliG |
| View | Download | 0.253 | a.71.1 | Endoplasmic reticulum protein ERP29, C-domain |
| View | Download | 0.239 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.222 | a.29.3 | Acyl-CoA dehydrogenase C-terminal domain-like |
