| Protein: | SYPM_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 543 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SYPM_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
429.0 | [0..7] | [543..6] |
|
Region A: Residues: [1-76] |
1 11 21 31 41 51
| | | | | |
1 MVSSSLRLPS LTSLLFPATT RYPATLRRTV CLRNRPLSGF ATAPSGTASP ETKSSEVDRL 60
61 RSDRAVTPRS QDFNAW
|
| Detection Method: |  |
| Confidence: | 89.522879 |
| Match: | 1qf6A |
| Description: | Threonyl-tRNA synthetase (ThrRS), C-terminal domain; Threonyl-tRNA synthetase (ThrRS), N-terminal 'additional' domain; Threonyl-tRNA synthetase (ThrRS), second 'additional' domain; Threonyl-tRNA synthetase (ThrRS) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [77-543] |
1 11 21 31 41 51
| | | | | |
1 YLDVIASAEL ADYGPVRGTM VIRPYGYAIW EAIQDYLNVK FKETGHSNMY FPQFIPYSFI 60
61 EKEASHVEGF SPELALVTVG GGKELEEKLV VRPTSETIVN HMFTQWIHSY RDLPLMINQW 120
121 ANVTRWEMRT KPFIRTLEFL WQEGHTAHAT PEEAEKEAKQ MIEIYTRFAF EQTAIPVIPG 180
181 RKSKLETFAG ADITYTIEAM MGDRKALQAG TSHNLGQNFS RAFGTQFADE NGERQHVWQT 240
241 SWAVSTRFVG GIIMTHGDDT GLMLPPKIAP IQVVIVPIWK KDTEKTGVLS AASSVKEALQ 300
301 TAGVRVKLDD TDQRTPGWKF NFWEMKGIPL RIEIGPRDVS SNSVVVSRRD VPGKAGKVFG 360
361 ISMEPSTLVA YVKEKLDEIQ TSLLEKALSF RDSNIVDVNS YAELKDAISS GKWARGPWSA 420
421 SDADEQRVKE ETGATIRCFP FEQTQGTKTC LMTGNPAEEV AIFAKSY
|
| Detection Method: | |
| Confidence: | 108.0 |
| Match: | 1h4qA |
| Description: | Prolyl-tRNA synthetase (ProRS) domain; C-terminal domain of ProRS; Prolyl-tRNA synthetase (ProRS) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ligase activity, forming carbon-oxygen bonds | 7.20130208252979 | bayes_pls_golite062009 |
| ligase activity, forming aminoacyl-tRNA and related compounds | 7.20130208252979 | bayes_pls_golite062009 |
| aminoacyl-tRNA ligase activity | 7.18884532579969 | bayes_pls_golite062009 |
| ligase activity | 6.46734856052643 | bayes_pls_golite062009 |
| proline-tRNA ligase activity | 3.48471569615425 | bayes_pls_golite062009 |
| catalytic activity | 2.36416267096403 | bayes_pls_golite062009 |
| phenylalanine-tRNA ligase activity | 1.82630084735103 | bayes_pls_golite062009 |
| serine-tRNA ligase activity | 1.67995723068335 | bayes_pls_golite062009 |
| threonine-tRNA ligase activity | 1.61348476813499 | bayes_pls_golite062009 |
| histidine-tRNA ligase activity | 1.44658852946316 | bayes_pls_golite062009 |
| alanine-tRNA ligase activity | 1.37855221028045 | bayes_pls_golite062009 |
| lysine-tRNA ligase activity | 1.2286808923607 | bayes_pls_golite062009 |
| glycine-tRNA ligase activity | 1.22845858760023 | bayes_pls_golite062009 |
| asparagine-tRNA ligase activity | 0.50755166961092 | bayes_pls_golite062009 |
| binding | 0.005931666351503 | bayes_pls_golite062009 |
