| Protein: | TRP1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 578 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TRP1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
640.0 | [0..1] | [578..1] |
|
|
489.0 | [0..1] | [560..1] |
|
|
488.0 | [0..1] | [565..1] |
|
|
477.0 | [0..1] | [560..1] |
|
Region A: Residues: [1-230] |
1 11 21 31 41 51
| | | | | |
1 MVSHKCVEEF GYASYLVPSN ARAPRSARKR RSIEKRISKE DDNMCAIDLL ATVAGHLSFE 60
61 SGSSLMSIDK LIEDHRVKEE FPEEEKPLMP VALSPYRGSL SPCGFSSVIN GKVENEVDGF 120
121 SYSGGSDACQ VGNFSQDVKP DIDGDAVVLD ARPNVVVSLG SSSRTEVPSI GNCVSHGVRD 180
181 DVNLFSRDDD ENFSKYIHPR VTKHSPRTVP RIGDRRIRKI LASRHWKGGS
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [231-371] |
1 11 21 31 41 51
| | | | | |
1 RHSDTKPWRN YYLHQQRSYP IKKRKNFDHI SDSVTDDYRM RTKMHRGSRK GQGASFVASD 60
61 SHVKLRIKSF RVPELFIEIP ETATVGSLKR MVMEAVSTLL SDGHRVGLMV QGKKVRDDNK 120
121 TLHQTGISQD NSHLDSLDFS L
|
| Detection Method: | |
| Confidence: | 1.0 |
| Match: | 2ojrA |
| Description: | No description for 2ojrA was found. |
|
Region A: Residues: [372-462] |
1 11 21 31 41 51
| | | | | |
1 EPSSEMPQLL TSHPLGHACE ELLPVCQATK IDNVLESDHH DSALFPSDSL GNNNVTEDSK 60
61 AMISVALNEL SSQSQPPSRK SRRSEQQQQQ A
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.557 | a.247.1 | Description not found. |
| View | Download | 0.516 | a.159.4 | Description not found. |
| View | Download | 0.484 | a.247.1 | Description not found. |
| View | Download | 0.473 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.473 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.453 | a.3.1 | Cytochrome c |
| View | Download | 0.453 | a.3.1 | Cytochrome c |
| View | Download | 0.444 | a.46.1 | Methionine synthase domain |
| View | Download | 0.390 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.380 | a.3.1 | Cytochrome c |
|
Region A: Residues: [463-578] |
1 11 21 31 41 51
| | | | | |
1 AQRRIRRPFS VAEVEALVQA VEKLGTGRWR DVKLCAFEDA DHRTYVDLKD KWKTLVHTAK 60
61 ISPQQRRGEP VPQELLNRVL NAHGYWTQQQ MQQLQQNVNK LEQETQSQTT EGLLLL
|
| Detection Method: | |
| Confidence: | 10.39794 |
| Match: | 2ajeA |
| Description: | No description for 2ajeA was found. |
