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Protein Overview: TRP1_ARATH

General Information:
Name(s) found: TRP1_ARATH [Swiss-Prot]
Description(s) found:
Found 14 descriptions.
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  • Telomere repeat-binding protein 1 OS=Arabidopsis thaliana GN=TRP1 PE=1 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 578 amino acids

    Gene Ontology:
    Cellular Component: nucleus [ISS]
    Biological Process: response to gibberellin stimulus [IEP]
    response to salt stress [IEP]
    response to jasmonic acid stimulus [IEP]
    response to cadmium ion [IEP]
    response to salicylic acid stimulus [IEP]
    response to ethylene stimulus [IEP]
    response to auxin stimulus [IEP]
    Molecular Function: DNA binding [ISS]
    double-stranded telomeric DNA binding [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSHKCVEEF GYASYLVPSN ARAPRSARKR RSIEKRISKE DDNMCAIDLL ATVAGHLSFE  60
   61 SGSSLMSIDK LIEDHRVKEE FPEEEKPLMP VALSPYRGSL SPCGFSSVIN GKVENEVDGF 120
  121 SYSGGSDACQ VGNFSQDVKP DIDGDAVVLD ARPNVVVSLG SSSRTEVPSI GNCVSHGVRD 180
  181 DVNLFSRDDD ENFSKYIHPR VTKHSPRTVP RIGDRRIRKI LASRHWKGGS RHSDTKPWRN 240
  241 YYLHQQRSYP IKKRKNFDHI SDSVTDDYRM RTKMHRGSRK GQGASFVASD SHVKLRIKSF 300
  301 RVPELFIEIP ETATVGSLKR MVMEAVSTLL SDGHRVGLMV QGKKVRDDNK TLHQTGISQD 360
  361 NSHLDSLDFS LEPSSEMPQL LTSHPLGHAC EELLPVCQAT KIDNVLESDH HDSALFPSDS 420
  421 LGNNNVTEDS KAMISVALNE LSSQSQPPSR KSRRSEQQQQ QAAQRRIRRP FSVAEVEALV 480
  481 QAVEKLGTGR WRDVKLCAFE DADHRTYVDL KDKWKTLVHT AKISPQQRRG EPVPQELLNR 540
  541 VLNAHGYWTQ QQMQQLQQNV NKLEQETQSQ TTEGLLLL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..230] deduced N/A No confident structure predictions are available.
    2 View Details [231..371] FFAS03 1.0 No description for 2ojrA was found.
    3 View Details [372..462] deduced N/A No confident structure predictions are available.
    4 View Details [463..578] PSI-BLAST 10.39794 No description for 2ajeA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle