| Protein: | gi|4115942, gi|7... |
| Organism: | Arabidopsis thaliana |
| Length: | 575 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|4115942, gi|7....
| Description | E-value | Query Range |
Subject Range |
|
|
363.0 | [0..4] | [483..43] |
|
Region A: Residues: [1-299] |
1 11 21 31 41 51
| | | | | |
1 MGNCCGSKPL TASDIVSDQK QETILGKPLE DIKKHYSFGD ELGKGKSYAC KSIPKRTLSS 60
61 EEEKEAVKTE IQIMDHVSGQ PNIVQIKGSY EDNNSIHIVM ELCGGGELFD KIDALVKSHS 120
121 YYSEKDAAGI FRSIVNAVKI CHSLDVVHRD LKPENFLFSS KDENAMLKAI DFGCSVYIKE 180
181 GKTFERVVGS KYYIAPEVLE GSYGKEIDIW SAGVILYILL SGVPPFQTGI ESIIVSTLCI 240
241 VDAEIKECRL DFESQPWPLI SFKAKHLIGK MLTKKPKERI SAADVLEHPW MKSEAPDKP
|
| Detection Method: |  |
| Confidence: | 62.69897 |
| Match: | 2qg5A |
| Description: | No description for 2qg5A was found. |
|
Region A: Residues: [300-455] |
1 11 21 31 41 51
| | | | | |
1 IDNVVLSRMK QFRAMNKLKK LALKVIAEGL SEEEIKGLKT MFENMDMDKS GSITYEELKM 60
61 GLNRHGSKLS ETEVKQLMEA VSADVDGNGT IDYIEFISAT MHRHRLERDE HLYKAFQYFD 120
121 KDGSGHITKE EVEIAMKEHG MGDEANAKDL ISEFDK
|
| Detection Method: | |
| Confidence: | 4.41 |
| Match: | 2aaoA |
| Description: | Regulatory apparatus of Calcium Dependent protein kinase from Arabidopsis thaliana |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [456-575] |
1 11 21 31 41 51
| | | | | |
1 NNDGKIDYEE FCTMMRNGIL QPQGKLLKRL YMNLEELKTG LTRLGSRLSE TEIDKAFQHF 60
61 DKDNSGHITR DELESAMKEY GMGDEASIKE VISEVDTDNV SCTLQHIANI SNIKQVLETL 120
121
|
| Detection Method: | |
| Confidence: | 20.221849 |
| Match: | 1s6iA |
| Description: | Ca2+-regulatory region (CLD) from soybean calcium-dependent protein kinase-alpha (CDPK) in the presence of Ca2+ and the junction domain (JD) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| cytoskeletal protein binding | 3.49668552859347 | bayes_pls_golite062009 |
| motor activity | 3.25814691068414 | bayes_pls_golite062009 |
| binding | 3.17556402087346 | bayes_pls_golite062009 |
| tubulin binding | 2.51210014078446 | bayes_pls_golite062009 |
| actin binding | 2.38676888633305 | bayes_pls_golite062009 |
| microtubule binding | 2.17136406283012 | bayes_pls_golite062009 |
| calcium ion binding | 1.40919295397643 | bayes_pls_golite062009 |
| ion binding | 1.36376383271837 | bayes_pls_golite062009 |
| metal ion binding | 1.34827363853601 | bayes_pls_golite062009 |
| cation binding | 1.34827363853601 | bayes_pls_golite062009 |
| protein binding | 1.16246005294206 | bayes_pls_golite062009 |
| microfilament motor activity | 1.0725773039399 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 1.05536109719637 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 1.02622810676526 | bayes_pls_golite062009 |
| kinase activity | 1.01041521285233 | bayes_pls_golite062009 |
| structural constituent of muscle | 0.99845401805886 | bayes_pls_golite062009 |
| actin filament binding | 0.836375875773328 | bayes_pls_golite062009 |
| structural molecule activity | 0.800850121197479 | bayes_pls_golite062009 |
| G-protein beta/gamma-subunit binding | 0.77824189826064 | bayes_pls_golite062009 |
| transporter activity | 0.594904129738596 | bayes_pls_golite062009 |
| transcription regulator activity | 0.450279748770607 | bayes_pls_golite062009 |
| transmembrane transporter activity | 0.346694954512987 | bayes_pls_golite062009 |
| transferase activity | 0.297929823471296 | bayes_pls_golite062009 |
| actin-dependent ATPase activity | 0.254497017648009 | bayes_pls_golite062009 |
| nucleic acid binding | 0.221865849692192 | bayes_pls_golite062009 |
| myosin binding | 0.125186564742711 | bayes_pls_golite062009 |
| structural constituent of cytoskeleton | 0.116648335890738 | bayes_pls_golite062009 |
| DNA binding | 0.0960817636106102 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.0489908313324834 | bayes_pls_golite062009 |
