| Protein: | gi|7452433, gi|1... |
| Organism: | Arabidopsis thaliana |
| Length: | 736 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7452433, gi|1....
| Description | E-value | Query Range |
Subject Range |
|
|
290.0 | [0..378] | [733..67] |
|
|
249.0 | [0..21] | [375..14] |
|
|
248.0 | [0..18] | [375..103] |
|
|
247.0 | [0..21] | [375..14] |
|
|
243.0 | [0..21] | [375..14] |
|
|
243.0 | [0..21] | [375..14] |
|
Region A: Residues: [1-480] |
1 11 21 31 41 51
| | | | | |
1 MEKDNCNKKS LSEVLDVRQF RHTNSPVFST AIFAVIMLLV VAGTILSNMS LKSTFFWSSP 60
61 TSENGEEVIG SSKEHYKQRQ DRLASLTSNR IRGFQVDQPF RAVSSDEYFG KREMLAVESV 120
121 FKAHPQGCLM IVSGSLDSLQ GDSILKPLND RGYKVFAATP DMSLLLENTP AKSWFQEMKS 180
181 CKRDPGRIPL HQNLSNLARL AFLYKYGGVY LDTDFIVTRS FKGLKNSIGA QTVVEGDSKN 240
241 WTRLNNAVLI FEKDHPLVYS FIEEFASTFD GNKWGHNGPY LVTRVAQRAR ETIGDNFTVL 300
301 PPVAFYPFNW LDIPRLFQTP RGSNDSTLLK TDLVKLNRES YGLHLWNKIT RKLKIESPKS 360
361 TLYDNNLPFK PNVPLPRPYG PMSSSCNINS VVDSEHKEKE LDPLLPPRKA SKNQRIDWFR 420
421 RKLPELEILK STTKSKSFHT RVLDLYNKNC SAQFFMIWLS PANSFGPREM LAIDTLFTTN 480
481
|
| Detection Method: |  |
| Confidence: | 0.995 |
| Match: | 2bvlA |
| Description: | Crystal structure of the catalytic domain of toxin B from Clostridium difficile in complex with UDP, Glc and manganese ion |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [481-587] |
1 11 21 31 41 51
| | | | | |
1 PGACLAILSN SLDSPNGYTI LKPLFDQGFN LIAVTIDIPF LVKNTPAEAW LKRLKSGNMD 60
61 PGSIPLFMNL SDLTRLAVLY KYGGVYLDTD IIFLNDMTGL RNAIGAQ
|
| Detection Method: | |
| Confidence: | 35.920819 |
| Match: | PF04488.6 |
| Description: | No description for PF04488.6 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [588-736] |
1 11 21 31 41 51
| | | | | |
1 SSDPATKRWT RLNNAVMVFD IYHPLMREFL QEYATTFDGN KWGYNSPYLV SRVIKRLGNK 60
61 PGYNNLTIFS PDAFYPVNWI KIQKLFKKPA TTREAKWVEK TVQDMNKGSY MIHLWNKVTR 120
121 KIKIEEGSVM HTLVSTHCTV CGNITNSHI
|
| Detection Method: | |
| Confidence: | 81.337242 |
| Match: | PF04572.3 |
| Description: | No description for PF04572.3 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
