Protein: | gi|7452433, gi|1... |
Organism: | Arabidopsis thaliana |
Length: | 736 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7452433, gi|1....
Description | E-value | Query Range |
Subject Range |
|
290.0 | [0..378] | [733..67] |
|
249.0 | [0..21] | [375..14] |
|
248.0 | [0..18] | [375..103] |
|
247.0 | [0..21] | [375..14] |
|
243.0 | [0..21] | [375..14] |
|
243.0 | [0..21] | [375..14] |
Region A: Residues: [1-480] |
1 11 21 31 41 51 | | | | | | 1 MEKDNCNKKS LSEVLDVRQF RHTNSPVFST AIFAVIMLLV VAGTILSNMS LKSTFFWSSP 60 61 TSENGEEVIG SSKEHYKQRQ DRLASLTSNR IRGFQVDQPF RAVSSDEYFG KREMLAVESV 120 121 FKAHPQGCLM IVSGSLDSLQ GDSILKPLND RGYKVFAATP DMSLLLENTP AKSWFQEMKS 180 181 CKRDPGRIPL HQNLSNLARL AFLYKYGGVY LDTDFIVTRS FKGLKNSIGA QTVVEGDSKN 240 241 WTRLNNAVLI FEKDHPLVYS FIEEFASTFD GNKWGHNGPY LVTRVAQRAR ETIGDNFTVL 300 301 PPVAFYPFNW LDIPRLFQTP RGSNDSTLLK TDLVKLNRES YGLHLWNKIT RKLKIESPKS 360 361 TLYDNNLPFK PNVPLPRPYG PMSSSCNINS VVDSEHKEKE LDPLLPPRKA SKNQRIDWFR 420 421 RKLPELEILK STTKSKSFHT RVLDLYNKNC SAQFFMIWLS PANSFGPREM LAIDTLFTTN 480 481 |
Detection Method: | |
Confidence: | 0.995 |
Match: | 2bvlA |
Description: | Crystal structure of the catalytic domain of toxin B from Clostridium difficile in complex with UDP, Glc and manganese ion |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [481-587] |
1 11 21 31 41 51 | | | | | | 1 PGACLAILSN SLDSPNGYTI LKPLFDQGFN LIAVTIDIPF LVKNTPAEAW LKRLKSGNMD 60 61 PGSIPLFMNL SDLTRLAVLY KYGGVYLDTD IIFLNDMTGL RNAIGAQ |
Detection Method: | |
Confidence: | 35.920819 |
Match: | PF04488.6 |
Description: | No description for PF04488.6 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
View | Download | 0.631 | N/A | N/A | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
View | Download | 0.575 | N/A | N/A | a.24.18 | Description not found. |
View | Download | 0.549 | N/A | N/A | a.46.1 | Methionine synthase domain |
View | Download | 0.528 | N/A | N/A | a.118.8 | TPR-like |
View | Download | 0.476 | N/A | N/A | a.24.26 | Description not found. |
View | Download | 0.469 | N/A | N/A | a.2.11 | Fe,Mn superoxide dismutase (SOD), N-terminal domain |
View | Download | 0.466 | N/A | N/A | a.48.3 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
View | Download | 0.457 | N/A | N/A | a.46.1 | Methionine synthase domain |
View | Download | 0.450 | N/A | N/A | a.2.11 | Fe,Mn superoxide dismutase (SOD), N-terminal domain |
Region A: Residues: [588-736] |
1 11 21 31 41 51 | | | | | | 1 SSDPATKRWT RLNNAVMVFD IYHPLMREFL QEYATTFDGN KWGYNSPYLV SRVIKRLGNK 60 61 PGYNNLTIFS PDAFYPVNWI KIQKLFKKPA TTREAKWVEK TVQDMNKGSY MIHLWNKVTR 120 121 KIKIEEGSVM HTLVSTHCTV CGNITNSHI |
Detection Method: | |
Confidence: | 81.337242 |
Match: | PF04572.3 |
Description: | No description for PF04572.3 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
View | Download | 0.427 | N/A | N/A | d.153.1 | N-terminal nucleophile aminohydrolases (Ntn hydrolases) |
View | Download | 0.427 | N/A | N/A | d.153.1 | N-terminal nucleophile aminohydrolases (Ntn hydrolases) |
View | Download | 0.327 | N/A | N/A | d.96.1 | Tetrahydrobiopterin biosynthesis enzymes-like |
View | Download | 0.301 | N/A | N/A | c.97.1 | Cytidine deaminase-like |
View | Download | 0.293 | N/A | N/A | a.184.1 | TorA specific chaperone TorD |
View | Download | 0.287 | N/A | N/A | c.23.12 | Formate/glycerate dehydrogenase catalytic domain-like |
View | Download | 0.239 | N/A | N/A | d.108.1 | Acyl-CoA N-acyltransferases (Nat) |
View | Download | 0.233 | N/A | N/A | d.153.1 | N-terminal nucleophile aminohydrolases (Ntn hydrolases) |