| Protein: | HDG7_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 682 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HDG7_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
752.0 | [0..41] | [681..10] |
|
|
742.0 | [0..2] | [678..55] |
|
|
739.0 | [0..22] | [681..24] |
|
|
735.0 | [0..18] | [681..67] |
|
Region A: Residues: [1-106] |
1 11 21 31 41 51
| | | | | |
1 MNGDLEVDMS RGDFNPSFFL GKLKDDEFES RSLSDDSFDA MSGDEDKQEQ RPKKKKRKTK 60
61 YHRHTSYQIQ ELESFFKECP HPNEKQRLEL GKKLTLESKQ IKFWFQ
|
| Detection Method: |  |
| Confidence: | 21.39794 |
| Match: | 1fjlA |
| Description: | Paired protein |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [107-195] |
1 11 21 31 41 51
| | | | | |
1 NRRTQMKTQL ERHENVILKQ ENEKLRLENS FLKESMRGSL CIDCGGAVIP GEVSFEQHQL 60
61 RIENAKLKEE LDRICALANR FIGGSISLE
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.748 | a.130.1 | Chorismate mutase II |
| View | Download | 0.748 | a.130.1 | Chorismate mutase II |
| View | Download | 0.574 | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.436 | d.58.18 | Regulatory domain in the aminoacid metabolism |
| View | Download | 0.414 | a.60.5 | Barrier-to-autointegration factor, BAF |
| View | Download | 0.414 | a.60.5 | Barrier-to-autointegration factor, BAF |
| View | Download | 0.392 | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.392 | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.378 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.307 | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.251 | a.59.1 | PAH2 domain |
| View | Download | 0.221 | d.50.1 | dsRNA-binding domain-like |
| View | Download | 0.206 | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
|
Region A: Residues: [196-431] |
1 11 21 31 41 51
| | | | | |
1 QPSNGGIGSQ HLPIGHCVSG GTSLMFMDLA MEAMDELLKL AELETSLWSS KSEKGSMNHF 60
61 PGSRETGLVL INSLALVETL MDTNKWAEMF ECIVAVASTL EVISNGSDGS RNGSILLMQA 120
121 EFQVMSPLVP IKQKKFLRYC KQHGDGLWAV VDVSYDINRG NENLKSYGGS KMFPSGCIIQ 180
181 DIGNGCSKVT WIEHSEYEES HTHSLYQPLL SSSVGLGATK WLATLQRQCE SFTMLL
|
| Detection Method: | |
| Confidence: | 3.48 |
| Match: | 2r55A |
| Description: | No description for 2r55A was found. |
|
Region A: Residues: [432-556] |
1 11 21 31 41 51
| | | | | |
1 SSEDHTGLSH AGTKSILKLA QRMKLNFYSG ITASCIHKWE KLLAENVGQD TRILTRKSLE 60
61 PSGIVLSAAT SLWLPVTQQR LFEFLCDGKC RNQWDILSNG ASMENTLLVP KGQQEGSCVS 120
121 LLRAA
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.662 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.542 | a.4.1 | Homeodomain-like |
| View | Download | 0.458 | d.110.4 | SNARE-like |
| View | Download | 0.444 | a.74.1 | Cyclin-like |
| View | Download | 0.443 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.425 | a.61.1 | Retroviral matrix proteins |
| View | Download | 0.424 | d.108.1 | Acyl-CoA N-acyltransferases (Nat) |
| View | Download | 0.424 | d.108.1 | Acyl-CoA N-acyltransferases (Nat) |
| View | Download | 0.413 | d.108.1 | Acyl-CoA N-acyltransferases (Nat) |
| View | Download | 0.397 | a.60.10 | Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain |
| View | Download | 0.303 | c.51.1 | Anticodon-binding domain of Class II aaRS |
| View | Download | 0.282 | c.51.1 | Anticodon-binding domain of Class II aaRS |
| View | Download | 0.262 | d.58.16 | Poly(A) polymerase, C-terminal domain |
| View | Download | 0.251 | d.80.1 | Tautomerase/MIF |
|
Region A: Residues: [557-682] |
1 11 21 31 41 51
| | | | | |
1 GNDQNESSML ILQETWNDVS GALVVYAPVD IPSMNTVMSG GDSAYVALLP SGFSILPDGS 60
61 SSSSDQFDTD GGLVNQESKG CLLTVGFQIL VNSLPTAKLN VESVETVNNL IACTIHKIRA 120
121 ALRIPA
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.593 | N/A | N/A | a.24.11 | Bacterial GAP domain |
| View | Download | 0.593 | N/A | N/A | a.24.11 | Bacterial GAP domain |
| View | Download | 0.510 | N/A | N/A | a.24.3 | Cytochromes |
| View | Download | 0.465 | N/A | N/A | a.24.3 | Cytochromes |
| View | Download | 0.441 | N/A | N/A | d.120.1 | Cytochrome b5 |
| View | Download | 0.426 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.420 | N/A | N/A | a.24.16 | Nucleotidyltransferase substrate binding subunit/domain |
| View | Download | 0.420 | N/A | N/A | a.24.16 | Nucleotidyltransferase substrate binding subunit/domain |
| View | Download | 0.403 | N/A | N/A | c.2.1 | NAD(P)-binding Rossmann-fold domains |
| View | Download | 0.402 | N/A | N/A | c.23.1 | CheY-like |
| View | Download | 0.359 | N/A | N/A | c.51.1 | Anticodon-binding domain of Class II aaRS |
| View | Download | 0.333 | N/A | N/A | d.198.1 | Type III secretory system chaperone |
| View | Download | 0.304 | N/A | N/A | b.55.1 | PH domain-like |
| View | Download | 0.275 | N/A | N/A | f.21.2 | Fumarate reductase respiratory complex transmembrane subunits |
| View | Download | 0.257 | N/A | N/A | a.36.1 | Signal peptide-binding domain |
