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View Structure Prediction Details

Protein: 4CLL9_ARATH
Organism: Arabidopsis thaliana
Length: 562 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for 4CLL9_ARATH.

Description E-value Query
Range
Subject
Range
gi|78044614, gi|... - gi|78044614|ref|YP_359514.1| acetyl-CoA synthetase [Carboxydothermus hydrogenoformans Z-2901], gi|77...
539.0 [0..5] [561..32]

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Predicted Domain #1
Region A:
Residues: [1-562]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLTKTNDSRL IDRSSGFDQR TGIYHSLRPS LSLPPIDQPL SAAEFALSLL LKSSPPATAG  60
   61 KNIEALTYLV NSSSGDNLTY GELLRRVRSL AVSLRERFPS LASRNVAFIL SPSSLDIPVL 120
  121 YLALMSIGVV VSPANPIGSE SEVSHQVEVS EPVIAFATSQ TVKKLQSSSL PLGTVLMDST 180
  181 EFLSWLNRSD SSSVNPFQVQ VNQSDPAAIL FSSGTTGRVK GVLLTHRNLI ASTAVSHQRT 240
  241 LQDPVNYDRV GLFSLPLFHV FGFMMMIRAI SLGETLVLLG RFELEAMFKA VEKYKVTGMP 300
  301 VSPPLIVALV KSELTKKYDL RSLRSLGCGG APLGKDIAER FKQKFPDVDI VQGYGLTESS 360
  361 GPAASTFGPE EMVKYGSVGR ISENMEAKIV DPSTGESLPP GKTGELWLRG PVIMKGYVGN 420
  421 EKASAETVDK EGWLKTGDLC YFDSEDFLYI VDRLKELIKY KAYQVPPVEL EQILHSNPDV 480
  481 IDAAVVPFPD EDAGEIPMAF IVRKPGSNLN EAQIIDFVAK QVTPYKKVRR VAFINAIPKN 540
  541 PAGKILRREL TKIAVDGNAS KL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 109.0
Match: 1ba3A
Description: FIREFLY LUCIFERASE IN COMPLEX WITH BROMOFORM
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
fatty acid ligase activity 4.83067429373059 bayes_pls_golite062009
long-chain fatty acid-CoA ligase activity 4.72692389032116 bayes_pls_golite062009
ligase activity, forming carbon-sulfur bonds 4.4819902512335 bayes_pls_golite062009
acetate-CoA ligase activity 3.83959707137518 bayes_pls_golite062009
acid-thiol ligase activity 2.89129353633634 bayes_pls_golite062009
CoA-ligase activity 2.5960476232329 bayes_pls_golite062009
ligase activity 2.49556073715112 bayes_pls_golite062009
luciferin monooxygenase activity 2.37933768142137 bayes_pls_golite062009
catalytic activity 1.83545185797733 bayes_pls_golite062009
binding 0.548022061473268 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle