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View Structure Prediction Details

Protein: gi|15238545, gi|...
Organism: Arabidopsis thaliana
Length: 350 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15238545, gi|....

Description E-value Query
Range
Subject
Range
gi|18412679 - gi|18412679|ref|NP_568084.1| beta-galactosidase [Arabidopsis thaliana]
181.0 [0..162] [307..19]

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Predicted Domain #1
Region A:
Residues: [1-156]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLWLFSQSSR PHFQSIHFFD CSLTSDRGQR SWPATLPSPQ PLSASTFLKC SPTEQPHLFR  60
   61 SKSDPISSIT TLTSDLFYVC TSSLMISVPT TSLSFHRRSY LSPQIRRTIT VLCSTEALLR 120
  121 FLLMGHSCLS PLTNSRPIPK SNDPSPLMTW PGPSKA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [157-350]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FPQNHRCLIH VAKCLKMIDI MIPSLRSDDY RSFFKCSSPI HLLIDFILEI ISYTLGTTLE  60
   61 SKSLMKNGIM IPSPRNGGYQ IFSNHFYPLI LNLEPQTKPE KTFTSHESPP LVLTSLLRFV 120
  121 PASHVAKDTF SKSKDQVFLI VTTPKLPDLV AKVSMIHHEV ICGLLFDCFC LCSSMDYKSY 180
  181 RPFLVVNSSS LKLL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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