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View Structure Prediction Details

Protein: gi|15238545, gi|...
Organism: Arabidopsis thaliana
Length: 350 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15238545, gi|....

Description E-value Query
Range
Subject
Range
gi|18412679 - gi|18412679|ref|NP_568084.1| beta-galactosidase [Arabidopsis thaliana]
181.0 [0..162] [307..19]

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Predicted Domain #1
Region A:
Residues: [1-156]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLWLFSQSSR PHFQSIHFFD CSLTSDRGQR SWPATLPSPQ PLSASTFLKC SPTEQPHLFR  60
   61 SKSDPISSIT TLTSDLFYVC TSSLMISVPT TSLSFHRRSY LSPQIRRTIT VLCSTEALLR 120
  121 FLLMGHSCLS PLTNSRPIPK SNDPSPLMTW PGPSKA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [157-350]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FPQNHRCLIH VAKCLKMIDI MIPSLRSDDY RSFFKCSSPI HLLIDFILEI ISYTLGTTLE  60
   61 SKSLMKNGIM IPSPRNGGYQ IFSNHFYPLI LNLEPQTKPE KTFTSHESPP LVLTSLLRFV 120
  121 PASHVAKDTF SKSKDQVFLI VTTPKLPDLV AKVSMIHHEV ICGLLFDCFC LCSSMDYKSY 180
  181 RPFLVVNSSS LKLL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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