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View Structure Prediction Details

Protein: gi|7486226, gi|2...
Organism: Arabidopsis thaliana
Length: 828 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for gi|7486226, gi|2....

Predicted Domain #1
Region A:
Residues: [1-325]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVPSEIESLG DESDRRFANL RGLRWRVNLG VLPFQSSSID DLRKATAESR RRYAALRRRL  60
   61 LIDPHLSKDV RNSPDLSIDN PLSQNPDSTW GRFFRNAELE KTLDQDLSRL YPEHWSYFQA 120
  121 PGCQGMLRRI LLLWCLKHPE YGYRQGMHEL LAPLLYVLHV DVDRLSEVRK SYEDHFIDRF 180
  181 DGLSFEERDI TYNFEFKKFL EDFTDDEIGG IQGNSKKIKS LDELDPEIQS IVRLSDAYGA 240
  241 EGELGIVLSE KFMEHDAYCM FDALMNGVHG CVAMAGFFAY SPASGSHTGL PPVLEASTAF 300
  301 YHLLSFVDSS LHSHLVELGV EPQYF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 41.69897
Match: 3dzxA
Description: No description for 3dzxA was found.

Predicted Domain #2
Region A:
Residues: [326-433]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GLRWLRVLFG REFLLQDLLI VWDEIFSADN TTRTDADNNT NQSYKIFDSP RGALISGMAV  60
   61 SMILCLRSSL LATENAASCL QRLLNFPEKI DVRKIIEKAK SLQTLALD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 36.09691
Match: 2qq8A
Description: No description for 2qq8A was found.

Predicted Domain #3
Region A:
Residues: [434-609]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DDVRSSALSI NDGFDQSISP AVPARTNSFP SGSTSPKSPL IITPQSYWED QWRVLHKAAE  60
   61 EEKKSPSPIQ KKKPWFRVKR LFRAESEPTH SAKSPNGKSE VKISSVARNL LEDFNRQLVS 120
  121 EPVEANPIDV VNNEDSSIRE TEDINTDFET AAEESIVMEE NSSDLFSDPN SPLRDS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [610-724]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NYIENDSDSS NESNLFPDET VKDRETSVVD SPLSISSQPS MEFIVSLSKD QETSVVDSPL  60
   61 PVSSQPSIEF PVTQSNDEDN AADKSVANIK ERSKVLPGKF QWFWKFGRNV TAEET

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [725-828]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RCNGVESSKS DLVCSSESHS LPQASSSGSK GDTDQNVMNT LKNLGNSMLE HIQVIESVFQ  60
   61 QERGQVQAGL IENLSKNNLV EKGQVTAMTA LKELRKISNL LLEM

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle