| Protein: | PP239_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 659 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PP239_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
521.0 | [0..6] | [658..83] |
|
|
514.0 | [0..38] | [659..22] |
|
|
509.0 | [0..9] | [657..139] |
|
|
504.0 | [0..69] | [658..40] |
|
Region A: Residues: [1-108] |
1 11 21 31 41 51
| | | | | |
1 MRGFASSASR IATAAAASKS LNASTSVNPK LSKTLNSSGK PTNPLNQRYI SQVIERKDWF 60
61 LILNQEFTTH RIGLNTRFVI SVLQNQDNPL HSLRFYLWVS NFDPVYAK
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.488 | a.118.8 | TPR-like |
| View | Download | 0.488 | a.118.8 | TPR-like |
| View | Download | 0.453 | a.40.1 | Calponin-homology domain, CH-domain |
| View | Download | 0.444 | a.70.1 | N-terminal domain of the delta subunit of the F1F0-ATP synthase |
| View | Download | 0.359 | a.74.1 | Cyclin-like |
| View | Download | 0.359 | a.74.1 | Cyclin-like |
| View | Download | 0.356 | a.118.9 | ENTH/VHS domain |
| View | Download | 0.291 | a.118.8 | TPR-like |
| View | Download | 0.284 | a.74.1 | Cyclin-like |
| View | Download | 0.278 | a.74.1 | Cyclin-like |
|
Region A: Residues: [109-578] |
1 11 21 31 41 51
| | | | | |
1 DQSLKSVLGN ALFRKGPLLL SMELLKEIRD SGYRISDELM CVLIGSWGRL GLAKYCNDVF 60
61 AQISFLGMKP STRLYNAVID ALVKSNSLDL AYLKFQQMRS DGCKPDRFTY NILIHGVCKK 120
121 GVVDEAIRLV KQMEQEGNRP NVFTYTILID GFLIAGRVDE ALKQLEMMRV RKLNPNEATI 180
181 RTFVHGIFRC LPPCKAFEVL VGFMEKDSNL QRVGYDAVLY CLSNNSMAKE TGQFLRKIGE 240
241 RGYIPDSSTF NAAMSCLLKG HDLVETCRIF DGFVSRGVKP GFNGYLVLVQ ALLNAQRFSE 300
301 GDRYLKQMGV DGLLSSVYSY NAVIDCLCKA RRIENAAMFL TEMQDRGISP NLVTFNTFLS 360
361 GYSVRGDVKK VHGVLEKLLV HGFKPDVITF SLIINCLCRA KEIKDAFDCF KEMLEWGIEP 420
421 NEITYNILIR SCCSTGDTDR SVKLFAKMKE NGLSPDLYAY NATIQSFCKM
|
| Detection Method: | |
| Confidence: | 17.69897 |
| Match: | 2gw1A |
| Description: | No description for 2gw1A was found. |
|
Region A: Residues: [579-659] |
1 11 21 31 41 51
| | | | | |
1 RKVKKAEELL KTMLRIGLKP DNFTYSTLIK ALSESGRESE AREMFSSIER HGCVPDSYTK 60
61 RLVEELDLRK SGLSRETVSA S
|
| Detection Method: | |
| Confidence: | 35.0 |
| Match: | 1w3bA |
| Description: | The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha. |
Matching Structure (courtesy of the PDB): |
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