| Protein: | LRK21_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 674 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LRK21_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
484.0 | [0..1] | [674..1] |
|
Region A: Residues: [1-218] |
1 11 21 31 41 51
| | | | | |
1 MAGVLGSVVF WLIIGIHVTF LVFAQEGDHF VYYDFRNADL ELDGMANTNH GPLHLTNNTN 60
61 TGTGHAFYNI PIKFTASSLS SFSFSTEFVF AIFPLQKSTY GHGMAFVVSP TKDLRSNGSA 120
121 NSNLGIFNRA NDNKTATHIF AVELDTNQNS ESFDKGGNDV GIDINSIVSV ESADASYFNA 180
181 RKGKNISLPL ASGKSILVWI DYDGIEKVLN VTLAPVQT
|
| Detection Method: |  |
| Confidence: | 23.39794 |
| Match: | 1bzwA |
| Description: | Legume lectin |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| protein binding | 1.80794638640093 | bayes_pls_golite062009 |
| binding | 1.76108014916376 | bayes_pls_golite062009 |
| transcription regulator activity | 1.11374828740804 | bayes_pls_golite062009 |
| nucleic acid binding | 1.0844198873157 | bayes_pls_golite062009 |
| DNA binding | 0.839970207978037 | bayes_pls_golite062009 |
| transcription activator activity | 0.356762680553561 | bayes_pls_golite062009 |
| transcription factor activity | 0.185213865921641 | bayes_pls_golite062009 |
|
Region A: Residues: [219-326] |
1 11 21 31 41 51
| | | | | |
1 PKPDSPYFSS FIKPKVPLLS RSINLSEIFT ETMYVGFSGS TGSIKSNQYI LGWSFKQGGK 60
61 AESLDISRLS NPPPSPKRFP LKEVLGATIS TIAFLTLGGI VYLYKKKK
|
| Detection Method: | |
| Confidence: | 3.63 |
| Match: | 1qmoE |
| Description: | Structure of FRIL, a legume lectin that delays hematopoietic progenitor maturation |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [327-674] |
1 11 21 31 41 51
| | | | | |
1 YAEVLEQWEK EYSPQRYSFR ILYKATKGFR ENQLLGAGGF GKVYKGILPS GTQIAVKRVY 60
61 HDAEQGMKQY VAEIASMGRL RHKNLVHLLG YCRRKGELLL VYDYMPNGSL DDYLFHKNKL 120
121 KDLTWSQRVN IIKGVASALL YLHEEWEQVV LHRDIKASNI LLDADLNGKL GDFGLARFHD 180
181 RGVNLEATRV VGTIGYMAPE LTAMGVTTTC TDVYAFGAFI LEVVCGRRPV DPDAPREQVI 240
241 LVKWVASCGK RDALTDTVDS KLIDFKVEEA KLLLKLGMLC SQINPENRPS MRQILQYLEG 300
301 NVSVPAISFG TVALGIPNIS HETVTQMTTT SSSANFSFED VTVLFGGR
|
| Detection Method: | |
| Confidence: | 68.0 |
| Match: | 2qkwB |
| Description: | No description for 2qkwB was found. |
