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View Structure Prediction Details

Protein: APS4_ARATH
Organism: Arabidopsis thaliana
Length: 469 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for APS4_ARATH.

Description E-value Query
Range
Subject
Range
gi|110740527 - gi|110740527|dbj|BAE98369.1| ATP sulfurylase precursor [Arabidopsis thaliana]
627.0 [0..1] [469..1]

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Predicted Domain #1
Region A:
Residues: [1-469]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSAAAIVS GSPFRSSPLI HNHHASRYAP GSISVVSLPR QVSRRGLSVK SGLIEPDGGK  60
   61 LMNLVVEESR RRVMKHEAET VPARIKLNRV DLEWVHVLSE GWASPLKGFM RQSEFLQTLH 120
  121 FNSFRLEDGS VVNMSVPIVL AIDDDQKFRI GDSNQVTLVD SVGNPIAILN DIEIYKHPKE 180
  181 ERIARTWGTT ARGLPYAEEA ITKAGNWLIG GDLQVLEPIK YNDGLDRFRL SPSQLREEFI 240
  241 RRGADAVFAF QLRNPVHNGH ALLMTDTRRR LLEMGYKNPV LLLNPLGGFT KADDVPLSWR 300
  301 MRQHEKVLED GVLDPETTVV SIFPSPMLYA GPTEVQWHAK ARINAGANFY IVGRDPAGMG 360
  361 HPTEKRDLYD ADHGKKVLSM APGLERLNIL PFKVAAYDKT QGKMAFFDPS RSQDFLFISG 420
  421 TKMRGLAKKK ENPPDGFMCP SGWKVLVDYY DSLSAETGNG RVSEAVASA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 156.0
Match: 1x6vB
Description: The crystal structure of human 3'-phosphoadenosine-5'-phosphosulfate synthetase 1
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 2.37674226834122 bayes_pls_golite062009
ligase activity 1.01418518097034 bayes_pls_golite062009
ligase activity, forming carbon-oxygen bonds 0.922796692287058 bayes_pls_golite062009
ligase activity, forming aminoacyl-tRNA and related compounds 0.922796692287058 bayes_pls_golite062009
aminoacyl-tRNA ligase activity 0.911887616296893 bayes_pls_golite062009
adenylyltransferase activity 0.19674866587635 bayes_pls_golite062009
sulfate adenylyltransferase activity 0.131596240193754 bayes_pls_golite062009
sulfate adenylyltransferase (ATP) activity 0.118324944285084 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle