| Protein: | AP3D_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 869 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AP3D_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
403.0 | [0..16] | [785..6] |
|
Region A: Residues: [1-628] |
1 11 21 31 41 51
| | | | | |
1 MSSSSTSIMD NLFQRSLEDL IKGFRLQLLG ESNFISRAVE EIRREIKATD LSTKSTALHK 60
61 LSYLAALHGV DMSWAAFHAV EVVSSSRFQH KRIGYQAITQ SFNDQTSVML LITNQVRKDL 120
121 NSANEYEVSL ALECLSRIGT HDLARDLTPE VFTLLGSSKS FVKKKAIGVV LRVFEKYHDA 180
181 VKVCFKRLVE NLETSDPQIL SAVVGVFCEL ATKDPQSCLP LAPEFYKVLV DSRNNWVLIK 240
241 VLKIFAKLAL IEPRLGKKVA EPICEHMRRT VAKSLVFECV RTVVSSLSDN EAAVKLAVAK 300
301 IREFLVEDDP NLKYLGLNAL SIVAPKHLWA VLENKEVVVK AMSDEDPNVK LEALHLLMAM 360
361 VNEDNVSEIS RILMNYALKS DPLFCNEIIF SVLSACSRNA YEIIVDFDWY LSLLGEMARI 420
421 PHCQRGEDIE HQLIDIGMRV RDARPQLVRV SWALLIDPAL LGNLFLHPIL SAAAWVSGEY 480
481 VEFSKNPYET VEALLQPRTD LLPPSIKAIY IHSAFKVLVF CLGSYFSSQE PTSSSLAQES 540
541 SSGSLLVNVF THESILSLVN VIELGLGPLS GYHDVEVQER AKNVLGYISV IKQEIAEQLN 600
601 LQDNETEASR VTAFMEDVFS EEFGPISA
|
| Detection Method: |  |
| Confidence: | 91.69897 |
| Match: | 1w63A |
| Description: | AP1 clathrin adaptor core |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [629-791] |
1 11 21 31 41 51
| | | | | |
1 TAQEKVCVPD GLELKENLGD LEEICGEHLK PVESDSVSYT DKISFSVSKL RIRDQQEATS 60
61 SSSPPHEASS LLAEHRKRHG MYYLTSQKED QDSNGTSSDY PLANELANEI SQDSFNPKRK 120
121 PNQSKPRPVV VKLDDGDESR ITPQAKTNIQ TANDDESLSR AIQ
|
| Detection Method: | |
| Confidence: | 7.522879 |
| Match: | 1iu1A |
| Description: | Gamma1-adaptin domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [792-869] |
1 11 21 31 41 51
| | | | | |
1 SALLVKNKGK EKDRYEGNPN SGQQEKEESS RIENHQNSEK KKKKKKKKKG EGSSKHKSRR 60
61 QNEVASASEQ VIIPDFLL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
