| Protein: | HEC1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 241 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HEC1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
125.0 | [0..1] | [240..46] |
|
Region A: Residues: [1-124] |
1 11 21 31 41 51
| | | | | |
1 MDSDIMNMMM HQMEKLPEFC NPNSSFFSPD HNNTYPFLFN STHYQSDHSM TNEPGFRYGS 60
61 GLLTNPSSIS PNTAYSSVFL DKRNNSNNNN NGTNMAAMRE MIFRIAVMQP IHIDPEAVKP 120
121 PKRR
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [125-241] |
1 11 21 31 41 51
| | | | | |
1 NVRISKDPQS VAARHRRERI SERIRILQRL VPGGTKMDTA SMLDEAIHYV KFLKKQVQSL 60
61 EEQAVVTGGG GGGGGRVLIG GGGMTAASGG GGGGGVVMKG CGTVGTHQMV GNAQILR
|
| Detection Method: | |
| Confidence: | 14.0 |
| Match: | 1am9A |
| Description: | SREBP-1a |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.12507195426228 | bayes_pls_golite062009 |
| nucleic acid binding | 0.43204604575196 | bayes_pls_golite062009 |
| DNA binding | 0.40884226851256 | bayes_pls_golite062009 |
| transcription regulator activity | 0.31759335140578 | bayes_pls_golite062009 |
| transcription factor activity | 0.09721565916723 | bayes_pls_golite062009 |
