| Protein: | NFYA6_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 308 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NFYA6_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
309.0 | [0..1] | [300..2] |
|
|
263.0 | [0..25] | [286..10] |
|
|
246.0 | [0..32] | [266..5] |
|
Region A: Residues: [1-157] |
1 11 21 31 41 51
| | | | | |
1 MQEFHSSKDS LPCPATSWDN SVFTNSNVQG SSSLTDNNTL SLTMEMKQTG FQMQHYDSSS 60
61 TQSTGGESYS EVASLSEPTN RYGHNIVVTH LSGYKENPEN PIGSHSISKV SQDSVVLPIE 120
121 AASWPLHGNV TPHFNGFLSF PYASQHTVQH PQIRGLV
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [158-243] |
1 11 21 31 41 51
| | | | | |
1 PSRMPLPHNI PENEPIFVNA KQYQAILRRR ERRAKLEAQN KLIKVRKPYL HESRHLHALK 60
61 RVRGSGGRFL NTKKHQESNS SLSPPF
|
| Detection Method: | |
| Confidence: | 34.853872 |
| Match: | PF02045.6 |
| Description: | No description for PF02045.6 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.529 | N/A | N/A | a.177.1 | Sigma2 domain of RNA polymerase sigma factors |
| View | Download | 0.529 | N/A | N/A | a.112.1 | Description not found. |
| View | Download | 0.527 | N/A | N/A | a.204.1 | Description not found. |
| View | Download | 0.519 | N/A | N/A | a.2.6 | Effector domain of the protein kinase pkn/prk1 |
| View | Download | 0.475 | N/A | N/A | a.204.1 | Description not found. |
| View | Download | 0.443 | N/A | N/A | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
| View | Download | 0.443 | N/A | N/A | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
| View | Download | 0.431 | N/A | N/A | a.24.7 | FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) |
| View | Download | 0.352 | N/A | N/A | a.7.5 | Tubulin chaperone cofactor A |
| View | Download | 0.346 | N/A | N/A | a.30.2 | Homodimeric domain of signal transducing histidine kinase |
| View | Download | 0.247 | N/A | N/A | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.235 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
|
Region A: Residues: [244-308] |
1 11 21 31 41 51
| | | | | |
1 LIPPHVFKNS PGKFRQMDIS RGGVVSSVST TSCSDITGNN NDMFQQNPQF RFSGYPSNHH 60
61 VSVLM
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
